KEGG   Cyanistes caeruleus (blue tit): 111929221
Entry
111929221         CDS       T05602                                 
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111929221 (ATRX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccae03000]
    111929221 (ATRX)
   03036 Chromosome and associated proteins [BR:ccae03036]
    111929221 (ATRX)
Transcription factors [BR:ccae03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    111929221 (ATRX)
Chromosome and associated proteins [BR:ccae03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111929221 (ATRX)
SSDB
Motif
Pfam: SNF2-rel_dom ADD_ATRX Helicase_C DUF6395
Other DBs
NCBI-GeneID: 111929221
NCBI-ProteinID: XP_023782500
Position
4
AA seq 2469 aa
MEEDFGISAQRFVTPVASHYENLATQTWYSESKLNTLVQKLHDFLAHSSEESEDANSPPA
LSKNKSIGKSREPKGSPASMENNRDEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQI
IDETVNEDISNENSENDVDMQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEA
PKKRGEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGM
DEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDL
VTACDSVFENLEQLLQQNKKKMKVENEKSKIYDHTVKFSPKRNNANCNGEEKKLDNLYSG
SLTYSYKALMVPKDLLKKTKKLIETTTNLNSSFVSFLKNAAENVEISPAVQLCQLKAFKS
VLSDMKKAHLSLEEGLNLEIQALNVKIKDKNTKEKKPEVRSEKNEVKKDEGKEHVALKED
DATQTQKEVVSERPDSEPMDQSVPSVEQTDNKAAPGEEKKSGRNEEPQYEPNSTEALDMD
IVSIPSSVPEDIFETLESAMEIQMPSDEQDSGNTATDHETSNSNAKLNTPVKDTKGGNKS
KSSAKGTKELVVKLTPVSLSESAVKAEDQDNSLEKDNKDIDASKDVDASEDDASKDADES
QARAANCDSVKQNHSAGSEPSTENDAVPVEDSDLRRSPRVKTTPLRRPTDMSPLTSNSEE
DSNDTSNEKRKRKPSKQPRRKNDKRNSSDSTADGPSPNKSKKPYDLDHSSDSDELPAVLK
EAGMMSRSSSDSESNNEAPEKNQNASDFQKSPPVKDENGKRKRKSSSSGSDLDAKRGKSA
KNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKKSKKKHTQKDDSYDSSEEEQKKK
ASSKRKVNLKKKRGKSSEDDDAEKSPEKEINHSSKDKTGKRSAAKDKLNRDSKEKSAKGK
RDESSDAEKSSLEKEESPEVKKKKDSKKTKARDDSSSESTEKSAKKEHKLESSKDRSKNK
KASESKAKKSEKLKKKGFKKEQDDDSSDLDKSSAEKGSSNSSENDKIKKEPMFTEKRKLR
ERVAKRMHIDLSSDTEKSPQKEESSDDDATRRKKRSETKEKKKISHKKKISKKEQNDSSS
SDEESYEDTKKKIKKGSVKESKKSNLKKKVVKKKVVVTTSSSSDKEENDDQNSTGDGSSD
EQKIRPVTESLMLSADAGFCQSSGDEGEALARTIPMEEEEDDDDDPENRIAKKMLLEEIK
ANLSSDEDTSSDEQPVEGKKKPAKQTEHTGDNGEKEKEDKKSEKEDKKSEKEEHDSESDS
EEEETSKKPRYRHRLLRQKLTVSDGESGEEKKVVVKSKDKKEVGKRRNRRKVSSDDSNDS
EFQESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKS
NSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREV
IEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVK
KTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTGLVVCPLNTALNWLNEFEK
WQEGLEDEEKLEVYELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKL
KEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHC
MVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDY
TALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLS
RIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVRK
ECSSSGSGSDNDVEVIKVWNSRSRGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPD
WYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANRE
KSEREKPSIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGS
LGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVT
KQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELL
QINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGITMRFNMPTGTTTMPTN
FSSQTYIPYNLGALSAMSNQQLEDLINQGREKVVEATNSVAAARIQPLEDIIAAIWKENL
TLTESQVQALALNRQASQELDVKRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQ
QQQMSYQQAMGHLMMPKPPNLIMNPSNYPAIDVRGMYQSVSGGMQPPPLQRAPPPMRGKN
PGPSQGKSM
NT seq 7410 nt   +upstreamnt  +downstreamnt
atggaggaagattttggcatctctgcacagaggtttgtcacccctgtagcctcccactac
gaaaacctggccacacaaacctggtacagtgaaagcaagttgaatacattggtacagaaa
ctccatgacttcttggctcactcatcagaagaatctgaagacgcaaactctcctccagca
ttatctaaaaacaaaagtataggtaaaagtagagaacctaaaggaagcccagcttcaatg
gagaacaacagggacgagggaagtagttcttctgaaagaaccaaatccttaggatcatcc
cgttccaaaaggaaacctacagttgtaacaaaatatgttgggtcagatgatgaacaaatc
atagatgaaactgtaaatgaagatatttcaaatgagaactcagagaatgatgtagatatg
caaagcttgcctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaa
gatgattttaaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagct
cccaaaaagcgtggagaagaagggctccatggaattgtgagctgtacagcttgcgggcag
caggtgaaccattttcaaaaggattcaatctatagacaccctacactgaaagtgcttatt
tgtaagacttgctacaagtattacatgagtgatgacatcagtcgtgattcagatgggatg
gatgaacagtgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttctgccat
aacgccttctgtaaaaagtgcattttgcgcaacctgggccgaaaagagctctcgactatc
ctggatgaaaataatcagtggcactgttatatttgccatccagagcctttgttggacttg
gttactgcatgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaaaaa
aagatgaaagttgaaaatgaaaaaagtaaaatatatgaccacacagtcaagttttctcca
aagagaaataatgcaaattgtaatggggaagaaaaaaaattagataatttatattcaggt
tcactaacatattcttataaagcactaatggtgccaaaggacttgcttaagaaaacaaaa
aaactgattgaaactacaacaaatctgaattctagctttgtaagctttttgaaaaacgct
gcagaaaatgtagaaataagcccagctgtgcaactgtgccagctgaaagcttttaaatct
gtgctgagtgacatgaaaaaagctcatctgtcactagaagaaggcttgaacctggagatt
caagcactgaatgttaaaatcaaagataaaaataccaaagagaaaaaacctgaggttaga
tcagaaaaaaatgaggtgaaaaaagatgaaggaaaggagcatgtggcattaaaagaggat
gacgccacacagacacagaaagaagttgtgtcagagcgacctgacagtgagcccatggat
caaagtgttccctcagtggaacagacagataacaaggcagctcctggggaagagaaaaag
tctggcagaaatgaagaaccgcagtatgagccaaacagtacagaggctttagacatggat
atcgtgtccatcccctcgtctgttcctgaagatatttttgagactctggaatctgctatg
gagattcagatgccatcggatgagcaggacagtggaaacacagcaacagatcatgagact
tcaaattcaaatgcaaaattgaacactcctgtgaaagataccaaaggaggtaacaagtca
aaatcatcagctaaaggaacaaaagaactggttgtaaaattgactccagtttccctttca
gagtctgcagttaaagctgaagatcaagacaacagcctagaaaaggacaataaagacatt
gatgcatctaaagacgttgatgcatctgaagacgatgcatctaaagacgctgacgaatct
caagctagggcagcaaactgtgattctgtaaagcaaaaccacagtgctggcagcgagccc
tccacggagaatgacgctgtgcccgtggaggactcggatctccggaggtcgccgcgcgtc
aagaccaccccgctgaggcgccccacggacatgagccccctgacatccaactcagaagag
gacagcaatgacacgagcaatgaaaaacgaaagaggaaaccatccaagcagcccaggagg
aaaaacgataaaagaaactcttctgacagcactgctgatggtcccagtcctaacaaatcc
aaaaagccatatgacttagatcacagctcagactctgatgagttgccagctgtcctgaaa
gaagcagggatgatgagtcgcagctcctcagacagtgaaagcaacaatgaagcgccagaa
aagaatcaaaacgcttcagattttcaaaagagtccaccagtaaaggatgaaaatgggaaa
cgaaaaaggaaaagttccagttctggttcagatttagatgctaaaagaggcaaatcagct
aaaaatgctgctgctgctaaaaagaaacgacaaaactactcagattcctcaaactatgat
tccgagttagaaaaagagataaaaatgttgagtaaaattgaggctgcaaaaaaatcaaag
aaaaaacacacacaaaaagatgatagttatgattcctctgaagaggagcagaagaaaaaa
gcaagcagtaagagaaaggtaaatctgaagaagaagagaggtaaatcttctgaagatgat
gatgctgagaagtctccagagaaggaaattaatcactcttctaaagataaaacgggtaag
aggtcagctgctaaggacaagttaaacagagactcaaaagaaaaatctgcaaagggaaaa
cgcgatgagtcttcagatgctgagaaatcttcactggagaaagaggagagtcctgaagtt
aagaaaaagaaggattcaaaaaagacaaaggcacgggatgattcttcttctgagagtact
gagaaatcggcaaagaaagagcacaagttggagtcttcaaaagacagatccaagaacaaa
aaagcatcagaaagcaaagcaaagaaatctgaaaaattgaaaaagaaaggtttcaagaaa
gaacaagatgatgactcctctgatcttgataagtcatctgcagagaaaggaagtagcaat
tcttctgaaaacgacaaaattaaaaaggaacccatgtttacagaaaagaggaaattgaga
gagagagtagctaaaagaatgcacattgatttatcctctgatactgagaaatctccccaa
aaagaggagagttctgatgatgatgccacaaggcgtaaaaaacgaagtgaaacgaaagaa
aagaaaaaaataagccacaaaaagaaaatttccaagaaagaacagaatgactcatcctct
tctgatgaggagtcttatgaagacactaagaaaaagattaaaaaaggatcagtaaaagaa
agtaaaaaaagcaacttaaaaaagaaagttgtaaaaaagaaggtggttgtcactacttct
tcctcgtctgataaggaagaaaacgatgatcagaattccacaggcgatggaagcagcgat
gagcagaagatcaggccggtgaccgaaagcttgatgctgtctgctgatgcaggattttgt
cagtcatcaggagatgagggagaggctctagcaaggactatcccaatggaggaggaggaa
gatgatgatgacgaccctgagaatagaattgccaagaaaatgcttttagaagaaatcaaa
gccaatctttcctctgatgaggatacgtcttcagatgagcagccggtggaaggaaaaaag
aaacctgcaaagcaaactgaacacacaggagataatggagagaaggaaaaggaagacaag
aagtctgaaaaggaagacaagaagtctgaaaaggaagaacatgattctgagtcggactca
gaggaagaagaaacatccaagaagcccagatatagacacagactgctgaggcagaagctc
accgtgagtgatggggagtctggagaagaaaaaaaggtggtggtgaaatcaaaggacaaa
aaagaagtggggaagcgcagaaatagaaggaaagtgagcagtgatgactcaaatgactcc
gagttccaagagtctgcagtgagtgaagaggtcagcgagtctgaggatgaccagcggcca
aggacgagatctgccaagaaagctgaggccgaagaaaaccagcgcagctacaaacagaaa
aagaaacgaaggaggataaaggttcaagaggattcatcaagtgaaaatgagaataagagt
aactctgagaatgaggacaatgatgactcaaaatctcctgggaaaggcaggaagaaaatc
aggaaaattattaaagatgataagcttagaacagaaacacaaaatgcacttaaagaagaa
gaagaaagaagaaaacgtatagcagagagagaacgggagagagagaaactgagagaggtg
atagagattgaagatgcttctcctctgaaatgtcccattacaaccaagctggttttagat
gaagatgaagaaaccaaagaaccattagtgcaggttcacaggagtatagtgaccagactg
aagccacaccaagtagatggtgttcagtttatgtgggattgctgttgtgaatctgtaaaa
aaaaccaagacatctcctggctctggttgcattcttgctcactgtatgggcctggggaaa
acattacaggtagtaagttttctccacacagtcttgctatgcgacaaactggattttcgg
acaggtctggttgtgtgtccactcaacactgccttgaactggctgaatgagtttgaaaaa
tggcaagaaggtttagaagatgaagaaaaactagaggtctatgagctggcaactgtgaaa
aggcctcaggagaggagctacatgctgcagcactggcaggatgagggaggggtgatgatc
attggctatgagatgtatcgaaacctggcacaaggcaggaatgtgaagagcagaaaactt
aaagaaatattcaataaagctttagtcgatccaggtcctgacttcgtggtgtgtgatgaa
ggacacatactgaaaaatgaagcatctgctgtctctaaggcaatgaattctattaggtct
aggaggagaataattctgacaggaacaccactgcagaataatcttatagaatatcactgc
atggttaacttcattaaggagaatttgcttggctcaattaaagaattccggaatcgattc
atcaatcccatccaaaatgggcagtgtgcagactccactctggtggatgtcagagtgatg
aagaaacgtgctcacatcctctatgagatgttggctggctgtgttcagaggaaggattac
acagcattaaccaagttcctgccccccaaatacgagtacgtgctcgaggtgaggatgacc
ccaatccagtgcaagctgtaccagtattacctggatcatttgacaggtgtaggtggtggc
aatgaaggtggaagaggcaaagctggagctaaactattccaggatttccagatgttgagc
agaatctggactcacccttggtgtttgcagctggactatattagcaaagaaaataagggc
tattttgatgaagacagcatggatgacttcatagcttcagattccgacgaaacttccatg
agcttaagttctgatgattatgccaagaaaaaaaaatccaaggggaaaaaggtgaggaaa
gagtgtagctcaagtggaagtggcagtgataatgatgttgaagtcattaaagtctggaat
tcaagatctcgtggaggtggggaaggaaatgtagaagatcttacaaacaaccctgcatca
acaaagtcagatgaaggcaaagctacatcctcttccaatcctggtagtccagctccagac
tggtacaaagattttgtcactgatgcagatgctgaggtgttggaacattctgggaaaatg
gtgctgctctttgaaattcttcgaatggcagaggagctgggagacaaagtcctagtgttc
agtcagtccctaatatctctggatttgattgaagatttcctggagctggctaacagggag
aaatctgagagagaaaagccttctatctacaaaggtgaaggcaaatggttcagaaatatt
gattattatcgcttggatggctcaaccacagctcagtccagaaagaaatgggctgaggag
tttaatgatgaaactaatgtgagaggccgcttgtttatcatatccactaaagcaggttcc
ctgggaataaacctggtggctgctaacagagtcatcatctttgatgcctcttggaacccc
tcctatgacatccagagcatcttcagggtttatcgctttgggcagaacaagcctgtgttt
gtgtacaggtttttggctcagggaaccatggaggacaagatctatgaccggcaggtgacg
aagcagtcgctgtccttcagggtggtggaccagcagcaggtggagcggcacttcaccatg
aacgagctcaccgagctctacaccttcgagccagacctgctggatgaccccaactcggag
aagaagaagaagagggacacccccatgctgccaaaagacaccatcctggcagagctgctc
cagatcaacaaggagtacatcgttgggtaccacgaacatgattcactcctggaccataag
gaggaagaagagctcactgaagaagagaggaaggcagcctgggcagaatacgaagcagaa
aagaagggcatcaccatgcgtttcaacatgccaacagggaccaccacgatgcccacaaat
ttcagctctcagacatatattccttacaatttgggtgctctgtcagcaatgagtaaccaa
cagctggaggacctcattaatcagggaagagagaaggtggtggaagcaaccaacagtgtg
gctgcagcaagaatccagccccttgaagacatcattgcagccatatggaaagaaaactta
accctgacagagagccaggtgcaggccctggccctgaacagacaggccagccaggagctg
gatgtgaagcgccgagaagccatttacaacgacgtcctcgggaaacagcagatgttaatc
ggttgtgtccagaggatcctgatgaacaggcggctccagcaccagtacaaccagcagcag
cagcagcagatgtcctaccagcaagccatgggccacctcatgatgccaaagcctccaaat
ttaatcatgaatccttccaactacccagccatagatgtgagaggaatgtatcagtcagtg
tctggtgggatgcagccaccacccctacaacgagcaccacccccaatgagaggcaaaaat
ccagggccttcccaagggaaatcaatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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