KEGG T05602: 111940499

Cyanistes caeruleus (blue tit): 111940499

Entry

111940499         CDS       T05602

Symbol

TRIM13

Name

(RefSeq) E3 ubiquitin-protein ligase TRIM13

K12003

tripartite motif-containing protein 13 [EC:2.3.2.27]

Organism

ccae Cyanistes caeruleus (blue tit)

Brite

KEGG Orthology (KO) [BR:ccae00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccae04121]
    111940499 (TRIM13)
Enzymes [BR:ccae01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111940499 (TRIM13)
Ubiquitin system [BR:ccae04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    111940499 (TRIM13)

SSDB

Motif

Pfam:

zf-B_box zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 Herpes_IE2_3 U-box zf-Nse

Other DBs

NCBI-GeneID:

111940499

NCBI-ProteinID:

XP_023799018

Position

AA seq 409 aa
MMELLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTCRK
ETPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCAT
RGDHTKHVFCSIEEAYSQEKRAFETLFQGFETWRCGDALSRLDTLETSKRKALQMLTKDS
DKVKEFFEKLQHTLEQKRNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF
KDVSEPIIFLQQMQEFREKIKVLKETPLPCSTVDISPTMKSFDTSQWNGIKLVDVDKLSL
PQESNTFKFKIPSVFSRRFIVNSLIFLLILAVTRMSFVESVIDNLQCWKSQFLTICLSYL
ADTVEIADHAVFYWEQMTDGASLLREKCKNYTLVVLDNVAQFVCKYKLL

NT seq 1230 nt +upstreamnt +downstreamnt
atgatggagctcctagaagaagatctgacctgccccatttgctgtagcctgtttgatgat
cctcgtgtcctgccctgttcacacaatttctgcagaaagtgtctggaaggaattcttgag
ggaaatgtgcgaaacgtgctttggaggccatcccctttcaagtgccccacatgcaggaag
gagactcctgtcactggagtcaacagcttgcaggtcaactattccctgaaaggtatcgtg
gagaagtacaacaaaatcaaagtaactccaaaaatgcctgtgtgcaaagtgcacagcggg
caaccccttaacattttttgccggacagacatgcagctgatctgtggggtttgtgccacc
cgtggcgaccacacaaagcatgttttctgttccattgaggaagcttattcccaggagaag
cgggcttttgaaaccttgtttcagggcttcgaaacctggcgttgcggagatgccctctca
cggctggataccttagagaccagtaagaggaaagctctgcagatgctgacgaaagattct
gacaaagtgaaggagttctttgagaagctgcaacacacgttggagcagaagcgaaatgag
atcctgtctgactttgagaccatgaagcttgcagtgatgcaggcctacgatccggaaatc
aataagctgaacacgattctacaagagcagcggatggcttttaacattgcagaggccttc
aaagatgtgtctgaacccattatatttctgcaacagatgcaggagttcagggaaaaaatc
aaggtgctcaaagaaactcctttaccttgttccactgtggacatcagtcccacaatgaag
agttttgataccagccagtggaatggaataaaacttgttgatgtggacaaactttccttg
cctcaggaaagcaacactttcaaattcaagattccctctgtcttttcacgcagatttata
gtgaactctcttattttcttgctcattcttgctgtcaccagaatgtcctttgtggagtca
gtcattgacaatctccagtgctggaaatctcagttccttacaatttgcttgtcctatttg
gcagataccgtggagatagcagatcatgcagtcttttactgggaacagatgacagatgga
gcctcacttttaagagaaaagtgtaaaaactatacgttggttgtactggataacgttgcg
cagtttgtgtgcaaatataaactgttgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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