KEGG   Cyanistes caeruleus (blue tit): 111945686
Entry
111945686         CDS       T05602                                 
Name
(RefSeq) protocadherin beta-4-like
  KO
K16494  protocadherin beta
Organism
ccae  Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccae04515]
    111945686
Cell adhesion molecules [BR:ccae04515]
 Cadherins
  Protocadherins
   111945686
SSDB
Motif
Pfam: Cadherin Cadherin_C_2 Cadherin_2 Cadherin_3 PRIMA1
Other DBs
NCBI-GeneID: 111945686
NCBI-ProteinID: XP_023804111
Position
Unknown
AA seq 730 aa
REELCGQSATCMLPFELLLSNPLQFFRVEVALEDINDHSPVFPEERVTFDITEKSDLGSR
FPLEAAQDLDIGSNTVQAYSISPENEYFSVAYRSRSEDDKYIELVLEKPLDREEQSEMSF
SVIAVDGGSPPRTGTTEVKIVILDVNDNPPIFTQERYFGKVLENMPEGSVVLTVLARDQD
AGVYGEISYQLSHALGQSDSAFVIDPITGEIKTTKPLDFEAAQSHELRVSATDGGGLSAI
CKVLVEVVDVNDNAPEVVVSSFSSPLPENTAPGTVVALFTVRDRDSGANGKISCGLEDQL
FFSLRPAYKNYYELVTVSALDREETARYILRVTAADAGSPPLTSTQTFTVDISDVNDNAP
VFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNGKVSYSLAAVQAAEGPWCSCVSVNSE
NGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANVSVRLVVLDENDNAPLVLYPGQDSS
PASSELVPVSAEAGYLITKVVAVDADSGQNSWLSYHLLRASEPGLFTVGVHSGEVRLRRP
VTERDSVRQKLLVLVRDNGKPPLSATAAVSALLLKDLSDVRLPGHSSPAPEDQAGSLTTY
LIIALVCVSLLFLVSTALFVARKVCKRKELKAGHVLYGADNLQSGLADGAAAGSLPRAYC
YEISLTTGSGNSEFKFLKPILPSVPPQHCAVGQGPEDEQHFPCVPVSTEDTAPDNRGTLS
AGHFNSLSFN
NT seq 2193 nt   +upstreamnt  +downstreamnt
cgggaggagctgtgcggccagtccgccacctgcatgctccccttcgagctgctgctctcc
aaccccctgcagttctttcgggtcgaggtggctctggaggatatcaatgaccattcaccc
gtcttccccgaggaacgagtgacttttgacatcacggaaaagagcgacctgggttcacgt
ttccctctggaggcagctcaggacctcgatattggcagcaacacagtccaggcatacagc
atttctcctgagaacgaatactttagtgtcgcttatagaagtcggagtgaggatgacaaa
tatattgaacttgttttggagaagccactagacagagaggagcagtcagagatgagtttc
agtgtcattgctgtggatggtggctctcctcccaggactgggacaactgaagtgaaaatt
gtcattctagatgtaaatgacaatcctcccatattcacacaagagcgttattttggaaaa
gtcctggagaacatgccagaagggtctgtagttttaacggtgctggcaagagatcaggat
gcaggagtttatggggaaatttcttaccaactcagccacgcactggggcagagtgactca
gcatttgtgattgatcccataactggtgaaattaaaaccacaaaacctctggactttgag
gcagcacaaagtcacgaactgagagtaagtgccacagatggtggtgggctctcagccatc
tgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagaggtggtggtcagc
tccttcagcagtcccctccccgagaacacagcgcccggcacggtggttgccctgtttacg
gtcagggaccgggattctggggccaacgggaagatctcgtgtggcctcgaggatcagctc
ttcttctcgctgcggccagcctataagaattactatgagctggtgacagtgagcgcgctg
gaccgcgaggagacggctcgctacatcctcagggtgacggcggcagacgcggggtcgcct
cctctgacgagcacgcagaccttcaccgtggacatctcggatgtcaatgacaacgccccc
gtcttcaaccagacgtcgtacaccatgtacgtgcgtgagaacaatgtgcccacggtgttt
gttggagccgtcagcgctgccgacgctgacgtggggctcaatggcaaggtgagctattcg
ctggcagcggtgcaggcggcagaggggccttggtgctcgtgcgtgtctgtgaactctgag
aacgggcacgtgtttgtgctgcggcccctggactacgagcgcttgaggcagacggaggtg
acggtcagtgcctctgacgcgggctctcctcccctcagagccaacgtcagcgtccgcctc
gtggtgctggacgagaacgacaacgccccgctcgtgctgtacccaggccaggacagcagc
ccagcgtccagtgagctggtgcccgtgtcggccgaggcgggctacctcatcaccaaagtg
gtggccgtggatgccgactccgggcagaactcgtggctctcgtaccacctgctgagggcc
agcgagccagggctgttcacggtgggtgtccacagcggggaggtgcgtctgaggaggccg
gtgacggagagagacagcgtgaggcagaagctccttgtcctggtcagagacaacggcaag
ccgcccctgtcggccacggcagctgtgagcgcgctcctgctcaaggacttgtcagacgtg
cgcctccccgggcacagcagcccggcgccagaggatcaggctggctccctcaccacctat
ttaatcattgccctggtgtgtgtctccctgctcttcctggtctccaccgcactctttgtg
gctcgcaaggtgtgcaagagaaaggagctgaaggctggccatgtgctttatggtgccgac
aacttgcagagcggcctggccgatggggccgctgcagggagcctgccccgcgcctattgc
tacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattcctcaagcccatc
ctgcccagcgtgccaccacagcactgcgccgtgggccagggcccggaggatgaacagcat
ttcccctgtgtccctgtcagcaccgaggacacggcaccagacaatcgtggcactctctct
gcaggacacttcaattctctttccttcaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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