KEGG   Cajanus cajan (pigeon pea): 109788617
Entry
109788617         CDS       T04868                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109788617
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccaj01009]
    109788617
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109788617
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109788617
Protein phosphatases and associated proteins [BR:ccaj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     109788617
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     109788617
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     109788617
SSDB
Motif
Pfam: B56 DUF5954
Other DBs
NCBI-GeneID: 109788617
NCBI-ProteinID: XP_020202979
Position
Unknown
AA seq 493 aa
MLKQFLSKLPRKNSKPDSDESYRGDSSRSDVSPRRNSRQHGGGGAAAAKRTSSSAVFPAS
TVSVIEPLVPFKDVPSSEKMTLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFV
SSCGSSRFGEASILALCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYEL
LLKFITSNCLDAKVAKKFIDHSFILRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYI
RKSINNLFYRFVFETERHNGVAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSM
GVYFQQLSYCVTQFIEKEPKLASIVIRGLLKYWPITNSQKEVMFLGELEEILEVINMVEF
QRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIVFPALEKNSQG
HWSQAVHNLTHNVRKMFVEMDEKLFLACHSQFKEEEAMLNAGAEKRKEAWKQLEHAASLQ
PVIGNTPVLVSPL
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgctgaagcaattcctcagtaaactccctcgcaagaactcgaagcccgactcggacgag
tcataccgaggcgactcgtcgcgctcggacgtttccccgcgcagaaacagccgccagcac
ggcggcgggggcgccgccgccgcgaaacggacgtcctcgtcggctgtgttcccggcgagc
acggtgtcggtgatagaacctttggtgccgtttaaggatgttccgagctcggagaagatg
acccttttcgtgagcaagctgagcctgtgttgcgtcacgttcgatttcacggaccctggt
aagaacacggttgagaaagaggttaaaagaagaaccttggtggaactcgttgatttcgtt
tcctcttgtgggtcctctagattcggtgaagcttctattctcgctctgtgtagaatgtgt
gctattaatctctttcgcgttttcccgccaaattataggtccaatcgtggtggtgagaat
gatgatgatgagccagcgtttgatcccgcttggcctcatttgcagcttgtgtatgaattg
ctgctcaagtttataacctcgaattgccttgatgctaaggttgctaagaagttcatcgac
cattcgtttattttaaggttgttggagttgtttgattcggaggatcctagggagagggac
tgcttgaagaccattctgcatagggtttatggcaagttcatggtgcataggccctacatt
aggaaatctattaacaacttgttttataggtttgtgtttgagactgagaggcacaacggg
gtggcggagttgttggagattttcgggagcataattagcggttttgctttgcctttgaag
gaggagcacaagatctttttgtggagggttttgatccccttgcacaagcccaagtccatg
ggggtctacttccagcagttgtcttactgcgtcacgcagtttatcgagaaagagcctaag
ttggccagcattgtgattagggggttgttgaagtattggccgataacgaatagtcagaaa
gaggtgatgttcctgggtgaactggaagaaattttggaagttattaacatggtagagttc
cagagggtcatggtgcctttgttttggcggattggatgctgcattaacagcttgcacttt
caggtggctgaaagagcccttttcttatggaacaacgaccacattgtcaacttgattgct
cacaaccgtcaggtaatcctgccgatcgtatttccagccttagagaagaattctcagggc
cactggagccaggcagtgcacaacctaactcataatgttagaaaaatgtttgtggagatg
gatgagaagctgttcctggcttgtcattctcagttcaaggaagaagaagcgatgctaaat
gccggagctgagaagcgcaaggaagcctggaaacaactagagcatgcagccagtctccag
cctgtgattggaaataccccagttttagtgtctccactttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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