KEGG   Cajanus cajan (pigeon pea): 109797478
Entry
109797478         CDS       T04868                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccaj03041]
    109797478
Spliceosome [BR:ccaj03041]
 Complex C
  Other components
   Complex C specific factors
    109797478
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC SecA_DEAD P-loop_SecA
Other DBs
NCBI-GeneID: 109797478
NCBI-ProteinID: XP_020213117
Position
3:complement(21618375..21621774)
AA seq 587 aa
MEEDDYEEYVPVAKRRAMEAQKILQRKGKASAAADDDLEKMRVAETKPSLLVKASQLKRE
QPEISVTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTEPLLTGWKPPLHVRRMSKKE
CDLIRKQWHIIVDGVDIPPPIKNFKDMRFPEPVLKKLKAKGIVQPTPIQVQGLPVILSGR
DMIGIAFTGSGKTLVFVLPMIMVAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVVEQ
FLIPLKEAGYPELRPLLCIGGVDMRSQLEIVKRGVHIVVATPGRLKDMLAKKKMNLDNCR
YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVG
RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
VAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDNEEITDI
SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIANNRKDYFGSGGYRGEI
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggaagaagatgattatgaggagtacgtgcctgtggccaagcgtcgggccatggaagct
cagaagattctccaacgcaaagggaaggcctctgctgccgctgatgatgatttggagaaa
atgagagtggctgaaactaagcccagtcttctggttaaagcgtcgcagttgaaacgggaa
cagcctgagatcagtgtcacggagcagattgttcaacaggagaaagagatgattgaaaac
ttgtcagatagaaaaaccctcatgtctgtccgcgaattggccaaggggatcacttataca
gaacctttgcttacagggtggaagccacctttgcatgtgagaaggatgtctaagaaggaa
tgtgatttgatccgcaagcagtggcatataatagttgatggtgtggatatcccaccccca
attaagaattttaaggatatgaggtttccagagccagttttgaagaagttgaaagctaag
gggattgtacaaccaacgcccattcaggtgcagggccttcctgttatcttatctgggcgg
gatatgattgggattgctttcacgggctccggaaaaactctggtatttgtgcttcctatg
atcatggtggcaatgcaagaggagattatgatgcctattgttcctggagaaggtccattt
ggtttgattatttgtccatcaagggaactggctaggcagacttacgaagtggttgaacaa
ttcttgatacctttaaaggaagctggatatccagagctcaggcctttgctttgcattggt
ggagtggatatgagatcacagcttgagattgtgaagaggggtgttcatattgttgttgcc
actcctggaagattgaaggatatgttggccaagaagaaaatgaatcttgataattgcagg
tatttaacacttgacgaggctgatcgattggttgatttgggatttgaagatgacataaga
gaagtttttgatcatttcaaagctcaaaggcagactcttctattttctgccactatgcca
accaaaattcagaactttgccagaagtgctttggtgaaacctattattgtcaatgtagga
cgtgcaggggcagcaaatcttgatgtaattcaggaggtagagtatgttaagcaagaggca
aagatagtttacctccttgagtgccttcagaaaaccccacctcctgttctgatattctgt
gagaacaaggctgacgtggatgatatccatgaataccttctgttgaaaggagtggaagca
gtggctattcatggaggcaaggatcaggaagagagagagtatgccattgcagcttttaag
gccggaaagaaagatgtgttggtagcaactgatgttgcatccaaaggtttggattttcct
gatattcagcatgtcattaactatgacatgccagctgaaattgaaaattatgtccatagg
attggacggactggaagatgtggcaagactggtatagcaacaacatttataaacaagaat
caaagtgagacaacattacttgatttgaaacatctcttgcaagaagcaaaacaaaggatt
cccccagttttggctgagttgaatgatccaatggaagataatgaagaaatcacggacata
agtggggtcaagggatgtgcatattgtggtgggcttggtcatcgaatccgtgattgtccc
aaattagaacatcagaagagcatggcaattgcaaataatagaaaggattattttggatct
ggaggttacagaggggaaatttga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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