KEGG   Cajanus cajan (pigeon pea): 109797720
Entry
109797720         CDS       T04868                                 
Name
(RefSeq) polyadenylate-binding protein 2 isoform X1
  KO
K14396  polyadenylate-binding protein 2
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109797720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109797720
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109797720
SSDB
Motif
Pfam: RRM_1 RRM_7 VapE-like_dom CC149 DUF932 Nup35_RRM_2 Lge1
Other DBs
NCBI-GeneID: 109797720
NCBI-ProteinID: XP_020213432
Position
1:2304083..2308929
AA seq 223 aa
MEEEEHEVYGGEIPDVGEMDGDAEPHRGSADVDMSAADDDAVKELDEMKERLKEMEEESA
ALREMQAKVEKEMGAVQDTASSDASQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGT
VNRVTILTDKFGQPKGFAYVEFLETDAVQEALLLNESELHGRQLKVMPKRTNVPGMKQHR
PRRFNPYMGYRFRRPYPPPYFYSPYGYGKVPRFRRPGRYMPYY
NT seq 672 nt   +upstreamnt  +downstreamnt
atggaggaggaagagcacgaggtgtacggtggtgagattcccgacgtcggagagatggac
ggagacgctgagcctcaccgtggctccgccgacgttgacatgtccgctgccgacgacgac
gccgtcaaggagctcgacgagatgaaggagcgcttgaaggaaatggaagaggaatctgcg
gctcttcgtgaaatgcaagccaaggtcgagaaggagatgggcgctgttcaagatactgcc
agttcagatgcttcacaggccaacaaggaggagacagattctcgttctgtttttgttggc
aatgttgattatgcatgcacaccagaagaagtacagcaacacttccaatcttgtggtaca
gtgaacagggttacgatcttgacagacaagtttggccagcctaaaggttttgcttatgtg
gaattccttgaaactgatgcagttcaggaggctctcctgttgaatgaatctgaattgcat
ggccgtcaattgaaggttatgcctaagaggaccaatgttcctggaatgaaacaacatcgt
cctaggcgctttaatccttatatggggtatcgcttcaggaggccatatcctcccccttac
ttttactccccttatggatacggaaaggttcccaggtttagaaggccaggtcggtacatg
ccgtactattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system