KEGG   Cajanus cajan (pigeon pea): 109803145
Entry
109803145         CDS       T04868                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    109803145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccaj03032]
    109803145
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109803145
Enzymes [BR:ccaj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     109803145
DNA replication proteins [BR:ccaj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    109803145
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     109803145
    Bloom's syndrome complex (BTR)
     109803145
   FA (Fanconi anemia) pathway
     109803145
SSDB
Motif
Pfam: DEAD Helicase_C RQC HRDC RecQ_Zn_bind ResIII TelA Enkurin
Other DBs
NCBI-GeneID: 109803145
NCBI-ProteinID: XP_020220186
Position
8:complement(19802262..19810670)
AA seq 1167 aa
MCCLVATDMRQSEANSAKGVKGNGKIPQGNWLQHANAHENFSCQAKFLSSNFMFSVPPKK
PCHEEPLPGNATFGVQQSENIQGSRRVQVEKAWIALSSLQNFSRNYVQPGKSVEVTPQLR
EDRRTTSFPGGYENDKNRCPDVSTTPIVINHISQGLVGSVTSVNNHTKYTGQINESSKCM
IADIGDDDLLGNIDVDQIVEKYQSTCTPKPSISKLPPTTPTAYNDNVLPPELCLDCIHGY
KLGLCPEAASHLQELKDNLIAISNELLDNSENLNSTQIAKLRNDRSQLNKQIQQLEQYIN
CGNLNEERQKSHQFASTAPPTSFMYETPQQTVLCNGPKRDAYMGNGTYGSSFQCLPSFSV
DNYSMSSAPVEREAFVPKIIEVNYIEGSGDKRWSSRDFPWTKELEVNNKRVFGNHSFRPN
QREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQAN
IPAAYLSANMEWAEQQEILRELNSDCCKYKLLYVTPEKVAKSDVLLRQLDNLHVRELLAR
IVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCI
IFRQSFNRPNLWYSVIPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLRECG
HKCAFYHGTMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY
HQECGRAGRDGQRSSCVLYYNYSDYIRVKHMLSQGAIEQSPMTSGYNRSNMTNSGRVLET
NTENLMRMVSYCENDVDCRRLLQLVHFGEKFNSSTCQKTCDNCLKITSFIEKDVTEIAKQ
LVELVKLMGQRFSSSHILEVYRGSLSQLVKKHRHETVSLHGAGKRLGKGEASRVLHHLVV
EDFLVEEVKKSDYYGSVSSILKVNEPKVRNLYAGQRIILRFPSSVKASKPGKSDITPAKG
SLTSGKPNVTLIDTPPEPQTEVDLNLSAKLYTALRMLRTSLVREAGEGVMAYHIFGNATL
QQISKRVPRTKEELLDINGISKTKVSKYGDRLLEIIENTINEYYKLEKVSSGSKGSADSC
KRRRGTNGGLNANDEDDDALTNSTGRSKRRTVKKQTRKDVVYDSPEEDYFHGCSDEDLDF
DVIEIDALDQVTCKNAAGRVLPQWTAS
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgtgttgtttggttgctactgacatgaggcaaagtgaagccaattcagccaagggtgtc
aaaggcaatggtaaaatcccgcagggtaattggctgcaacacgccaatgctcatgagaat
ttctcctgccaagccaagtttttgagctccaattttatgttctctgtcccacctaagaag
ccttgccatgaagaaccactccctgggaatgccacgtttggtgttcaacaaagtgaaaat
attcaaggctcacggagagtacaagttgagaaggcttggattgctctttcaagtctacaa
aattttagtagaaactatgtccaacctggaaaatcggttgaggttactcctcagcttcgt
gaagatagaagaacgacttccttcccagggggctatgagaatgacaagaataggtgtcca
gatgtctccacaaccccaattgttatcaatcatatttctcagggtttggttggttcagtc
acttcagtgaacaatcatactaagtacacaggccaaatcaacgagtcttccaaatgtatg
attgctgatattggtgatgatgacttacttgggaacattgatgttgaccaaattgttgag
aaataccagtcaacttgcactcccaaaccatcaatatccaagcttcctcctacaacacca
actgcatataatgataatgttttgccaccagagctgtgtttagattgcatccatggttac
aagttagggctttgccctgaagcagcaagtcatttgcaagaattgaaggataatctcatt
gctatctctaatgaactgcttgacaacagtgaaaaccttaattctacacagatagcaaag
cttcgcaatgataggtcacaactgaataagcaaattcaacagcttgaacaatatataaat
tgtggtaatcttaatgaggaaaggcaaaagtcacatcaatttgcatccacggcaccacct
acatctttcatgtatgaaacacctcaacaaactgtcctttgtaatggacctaagagagat
gcttatatgggtaatggaacatatgggtcatcgttccagtgtcttccatccttttctgta
gacaattatagcatgtcatcagctccagtggagagggaagcgtttgtcccaaagattatt
gaagttaattacattgaaggttctggagacaaacgttggagcagccgtgattttccttgg
acaaaagagttagaggttaataataaaagggtatttggaaatcactcattccgccccaat
caaagagaggtcattaatgccacaatgagtggatgtgatgtttttgttctgatgcccact
ggtggtggaaagagtctgacctatcagttaccagctcttatttgtccgggtataacatta
gtaatttctccccttgtgtccctgattcaggatcaaataatgcacctattgcaggcaaat
atacctgctgcttacttgagtgccaatatggaatgggctgaacagcaggagatcctacga
gaacttaattctgattgttgtaaatacaagttattatacgtgacacccgaaaaggttgcc
aaaagtgatgttcttctgcgacagttggacaatttacatgttcgtgagttgcttgcaagg
attgtaattgatgaggctcattgtgtgagccaatggggccatgattttagaccagattat
cagggacttggtatattgaaacagaaattcccaaatactcctgttttagctttaacagct
acagcaacagctagtgtaaaagaagatgttgtgcaagcactcggtcttgttaactgcatc
atttttcggcaaagttttaatcgcccaaacttatggtattctgttatccccaagaccaaa
aagtgtttggaggacattgacaaattcattagggagaatcattttgatgaatgtggcatt
atctattgtctttcacgaatggactgtgaaaaggttgctgaaaaattacgggaatgtggg
cataaatgtgcattttatcatggtaccatggatcctgctcaacgtgcttcagttcaaaag
cagtggagcaaagacgagatcaatataatttgtgctactgtggcatttggaatgggtatt
aacaaacctgatgtccggtttgtaatccaccattccctcccaaaatctattgaaggctat
catcaggaatgtggacgagctggtagagatggtcaacgttcatcctgtgtattgtattat
aactatagtgattatatacgagttaaacatatgttgagtcaaggagcaatagagcaaagt
cccatgacatccggatacaatcgttctaatatgacaaattcaggaagggtactagaaacc
aacaccgaaaaccttatgcgaatggtcagttattgtgaaaacgatgttgactgtcggcgc
cttctgcaacttgttcattttggggagaagttcaattcttcaacttgtcagaaaacatgt
gataattgcttgaagatcacaagcttcattgagaaggatgtcacagagattgcaaagcaa
ttggttgaacttgttaagctaatgggacagaggttctcctcatctcatatattagaagtg
taccgtggttccttaagccagttggtcaagaaacaccggcatgagactgtgagccttcac
ggtgctggaaagcgtctaggtaagggtgaggcttctcgcgtattacatcatcttgtcgtt
gaggattttcttgttgaggaagtaaagaaaagcgattattatggatcagtatcatcaata
ttgaaggtaaatgagcccaaggtccgtaatctttatgctgggcagagaattatattgaga
ttcccatcctctgtaaaggcatcaaaaccagggaaatctgatataactccagctaagggt
tctctgacatctgggaagcccaacgttacactaattgacactcctcccgaacctcaaact
gaagtggatttgaatctttcagctaagttatacactgctctacggatgttgaggacaagt
cttgttagagaagctggagagggtgttatggcttaccacatatttggtaatgctacgttg
cagcagataagcaagagagtgccgagaacaaaagaagaactccttgatatcaatggcatt
agcaagactaaggtaagcaagtatggggatcggttactagaaatcattgaaaatacaatt
aatgaatattacaagttggagaaagtgagcagtggcagcaaaggcagtgcggattcttgc
aaaaggagacgagggacaaatggagggctaaatgcaaatgatgaggatgatgacgcctta
acgaatagcacaggtcgttcaaagagaaggacggtaaagaaacaaactagaaaagatgtg
gtgtatgattctccagaggaagattatttccatggatgctctgatgaagacctagatttt
gacgtcatagaaattgatgcattagatcaagtaacatgtaaaaatgctgcaggaagagta
ctacctcaatggacagcatcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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