KEGG   Cajanus cajan (pigeon pea): 109808161
Entry
109808161         CDS       T04868                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
ccaj04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109808161
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109808161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccaj03041]
    109808161
   04121 Ubiquitin system [BR:ccaj04121]
    109808161
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109808161
Enzymes [BR:ccaj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109808161
Spliceosome [BR:ccaj03041]
 Complex B
  Other components
   Prp19 complex
    109808161
 Complex C
   Prp19-CDC5 complex
    109808161
Ubiquitin system [BR:ccaj04121]
 Ubiquitin ligases (E3)
  U-box type E3
   109808161
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109808161
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 PROPPIN WD40_like U-box PAS_11 zf-Nse DUF1635 V_ATPase_I_N
Other DBs
NCBI-GeneID: 109808161
NCBI-ProteinID: XP_020226623
Position
11:complement(30229573..30240544)
AA seq 525 aa
MNCSISGEVPEEPVVSRNSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVPIKTGKIVK
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQAERQFPVSAQNAITASAPVLSNGKRAAEDEDLAPGAKKIHPGISSSIIS
ELTDCNAALSQQRKKRQIPSTLAPLEALEAYTQISSHPFHKTNKQGIISLDILHSKDLIA
TGGIDTNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESFLTGSADKTVRLWQVSDDGN
YNCRHVLKDHTAEVQAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVFDSSGSSEGYT
SAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHVGPVTAISFSENGYFLATSAHDG
VKLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVANVKSEWNCIKT
FPDLSGTGKATCVKFGPDSKYIAVGSMDRNLRIFGLPGEDAPTES
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaattgctccatctccggtgaagttccggaagagcccgtcgtatccaggaactccggt
ctcctcttcgagaagcgtttgattgagcgacacatttcggattatgggaagtgtccaatt
actggagaaccacttactatggatgacattgtaccaatcaagacaggcaagatagtgaag
cccagacctgttcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg
gatgggttgatgctatctaattttgcattggagcaacaattgcatacggcaaggcaagag
cttagtcatgctctatatcagcatgatgccgcttgtcgagtgattgcaagactcaaaaag
gaacgagatgaagctaggtctttacttgcacaagcagaaaggcaattccctgtttctgca
cagaatgccataacagcaagtgcgcctgtcctgagcaatgggaaaagagctgctgaggat
gaggatctggcacctggtgcaaagaaaatccatcctggaatttcttctagcataatttcc
gagctaactgactgcaatgctgctctttcccagcagaggaagaagcgacagattccttca
actttggctcctcttgaagcattagaggcatatacccagatatctagtcacccctttcac
aaaacaaacaaacaaggcattatatctcttgatatccttcattcaaaggacttaattgca
actggaggtattgatacaaatgctgttatttttgaccgaccatctggacaaatattatct
acactcagtggtcactctaaaaaggtgaccagtgtaaagtttgtagctcagggcgaatca
ttcttaactggttcagcagacaagacagttcgtctatggcaagtgtctgatgatggtaac
tacaactgcaggcatgtcttgaaggaccataccgctgaggtgcaagctgtcactgtccat
gcaaccaataattactttgtgactgcttcacttgatggctcgtggtgcttttatgaactt
tcttcagggacatgtctgactcaggttttcgactcatcaggttcttctgaaggctacaca
tctgcagcttttcatcctgatggtctcattcttggaactggcaccacagaatctcttgtt
aagatctgggatgtaaaaagtcaggcaaatgttgctaggttcgatggacatgttgggcca
gtaactgccatatctttttctgagaatgggtacttccttgcgacttctgcccatgatggc
gttaagctttgggatctacgtaaattgaaaaacttcaggaattttgctccatacgattcg
gaaacaccaacaaactctgtggagttcgatcacagtggatcctaccttgcaattgctggc
tctgacataagggtttatcaagttgcaaatgtgaaatctgaatggaactgtatcaaaaca
ttccctgatttatccggaacagggaaggccacgtgtgtaaaatttggtccagattctaaa
tacatagcagttggttcaatggaccggaatcttcggatatttgggttgcctggcgaagat
gctcctactgagtcataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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