KEGG   Cajanus cajan (pigeon pea): 109810869
Entry
109810869         CDS       T04868                                 
Name
(RefSeq) exosome complex component RRP45A isoform X1
  KO
K03678  exosome complex component RRP45
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109810869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109810869
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109810869
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109810869
NCBI-ProteinID: XP_020230041
Position
Unknown
AA seq 442 aa
MEQRLANSWRMPINDIKFIETALLSDLRVDGRRPFDHRKLTIKLAKEDGSAEVHLGHTHV
MAFVTAQLLRPYRDRPNEGSLSIFTEFSPMADPSFEPARPADAAVELGRVIDRGLRESRA
IDTESLCVLSGKLVWSIRVDIHILDNAGNLVDAANIAALASLLTFRRPECSLSGDDGQEV
VVHPPEHRDPIPLIIHHLPIAVTFGFFSNENLLVIDPTHQEERVMTGRMTATVNSNGDVC
AIQKAGGEGVSQSVIMHCLKLAHTKATDITTKIRDAVEIHNNERALRKIKRHSSSVAVDV
CGAVIGLGEQNQLDGSHLENLKLKEEENFMECEATPSGQVQSKDQVSKDFVGGPSSWDPY
SECVNSDLLKASLASRGPSVPSKQKDSRRETKPKEPPQEIKTDSSPIDNALTAGQNNEGK
TLKDAVKPKHKRKKKVSSNSEN
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggaacagaggttagcaaacagttggcgaatgccaataaacgacatcaaattcatcgaa
acggcactcctttctgacctccgcgtcgacggccgccgccccttcgaccaccgcaagctc
accatcaaattggccaaagaagacggctccgctgaggtccatttgggccacacccacgtc
atggccttcgtcacggcccaactcctccggccctacagagacaggcccaacgagggctcc
ctctccatcttcaccgaattctctcccatggccgacccctccttcgagcccgcccgcccc
gccgacgccgccgtcgagctcggccgcgtcattgaccgcggcctccgcgagagccgcgcc
atcgacaccgagtcgctctgcgtcctctccgggaagctcgtctggtccattcgcgtcgac
attcacattctcgacaacgccggaaacctcgtcgacgccgccaacatcgccgcgttggcc
tcgctgttgacttttcggcggccggaatgctcgctgtcgggagacgacggtcaggaagtg
gtggtgcatcctcccgaacaccgcgaccctattcctttgattattcatcatcttcctatt
gccgtcaccttcggattcttcagcaatgaaaatcttctcgtgatagatccgacgcatcag
gaagagcgcgtgatgacgggacgcatgactgcgacggttaattcaaacggcgacgtttgt
gcgattcagaaggctggtggtgagggcgtgtctcagagcgttatcatgcattgcttgaaa
cttgctcatactaaagctactgatattacaaccaagattagggatgctgttgaaatacat
aacaatgaaagggcattgcggaagattaagcgacattcttcgtctgttgctgtggatgta
tgtggtgctgttattggattaggggagcaaaatcaattagatggtagtcatttggaaaat
ttgaagctgaaagaagaggaaaattttatggaatgtgaagccacaccctcaggacaagtg
caaagtaaggatcaagtgtcaaaagatttcgtaggtggtccctcgagttgggatccctac
tcagagtgtgtcaattcagatcttctaaaagcttctctagcttcacgtggaccgtcagtt
cctagtaaacaaaaggattcaagacgtgagactaagcccaaggaaccaccacaggaaatt
aagacagattcttcaccaattgacaatgctctaactgctgggcagaataatgaaggtaag
actctgaaggatgccgtcaagcccaaacacaagagaaaaaagaaagtatcttccaatagc
gaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system