KEGG   Ceratina calcarata (carpenter bee): 108623725
Entry
108623725         CDS       T06061                                 
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
ccal  Ceratina calcarata (carpenter bee)
Pathway
ccal00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108623725
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccal01007]
    108623725
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccal03016]
    108623725
Enzymes [BR:ccal01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     108623725
Amino acid related enzymes [BR:ccal01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   108623725
Transfer RNA biogenesis [BR:ccal03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108623725
 Prokaryotic type
   Other AARSs
    108623725
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 108623725
NCBI-ProteinID: XP_017877924
Position
Unknown
AA seq 1249 aa
MMEKLPETINFPKEEAIILELWKKCDAFQNCLRLSKGKPKYSFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAYQTGYHVERRFGWDTHGLPVEFEIDKELNIKGPDDVAKIGIANYNKEC
RSIVMKYATEWETIVGRIGRWIDFKNDYKTLYPWYMESIWWIFKELYNKGLVYQGVKVMP
YSTGCNTPLSNFESGQNYKDVVDPSVVVSFPLMDEPGVSILAWTTTPWTLPSNMALCCNP
TFEYVEVKDYSSDNVYIILESSLDLIYKSKESYTIQGKRKGSDLKGKRYEPPFPYFLHLR
NNGAFVVLNDTYVTAESGTGIVHQAPYFGEDDHRCCLEAGIITRDQEIVCPIDSCGRFVE
PVRDFVGKYVKDADKDIIKYLQANKRLVYSGSTKHSYPFCWRSDTPLIYKAVPSWFIRVE
SIKEKLIAVNSSTYWVPDYVKEKRFGNWLRDARDWAVSRNRYWGNPIPIWISEDGQEIVC
VGSIAELEELTNTKITDIHRESIDHLTIPSKRPGCPPLRRVPEVFDCWFESGSMPYAQMH
YPFEHRREFEESFPADFIGEGIDQTRGWFYTLLVISTALFGKAPFKNLVANGLILASDGQ
KMSKRKKNYPDPMEIINKYGADALRLYLINSPVVRAENLRFKEEGVRDVIKDVFLPWYNA
FRFLMQNVERFEREEKVNFVYDDSRGVYSDNIMDRWILSFTQTLLQSFKREMQAYKLYTV
IPHLVKYIDNLTNWYVRMNRRRIKGEGDSTDCQQALTTLFSVLYTIVCVNAPFTPFLTEF
MFQRLVKLLPPIKGNMDSVHYQMIPESNPQLIDEKIESAVSYMQTVIELGRVVRDRKTIP
VKYPLPKVIVIHQDPKVLKELETLKSYILEELNVKELIVTTDKNKYGVKLRAEPDHKTLG
ARLKGEFKSVTQAIKELDDEQLQVFIAQKEITVQGHKLEEQDLRLMFSFTGPAAEQLSKQ
YEAHSEGNVLILLDVTPDESMHNEGIAREVINRVQKLRKEAQLVPSDEAIAYYKIQDQDS
NLAKVIVSHKELIENGTKTRVEDVTKMSSEANIIIRKMQKIKGIDMDLILVNPGMGQIKN
DESIVEPFLKYANVELAGMKPRFGATSCTGTVLLEIPNSPASISYEQLKHEIELIFGIYG
CTYDLYAGNKLISQETNISSLHKQTIRIVKAGSIVRPVSAEQEVPVCKFVNVNSISGRGT
ILLENPKGSFNLDDTMLKQRLNILFKTSNLTKLVPKLVNELHGKTLELS
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgatggagaaactgcctgaaacgatcaatttcccgaaggaagaggcgatcatattggaa
ctgtggaaaaagtgtgacgcgttccaaaattgtctgagactgtccaaaggaaaaccaaag
tattcattctacgatggtccaccgttcgcgacgggattgccgcattacgggcatatactc
gcaggaacgataaaagacatcgtgacaaggtatgcctatcaaactggttatcacgtggag
agaagattcggctgggatactcacggtttgcccgtcgaattcgaaattgacaaggaatta
aacataaaaggtcccgacgatgttgctaaaatcggtatagcgaattataataaggaatgc
aggagcatagtaatgaaatatgcgacggaatgggaaacgattgttggtagaattggcaga
tggatagatttcaaaaatgattataaaacgttgtatccttggtacatggaaagtatatgg
tggatctttaaggagttgtacaacaaaggtctcgtctaccaaggtgtcaaagttatgccc
tattccacgggctgtaacacacccttgtcgaattttgagtctggtcaaaattacaaagac
gttgtggatccctctgtagtagtgtcgtttcctttgatggacgagccaggtgtctctatt
cttgcctggaccacgacaccctggactctacccagtaacatggcactctgttgcaatcct
actttcgaatatgtagaagtgaaggattactcttctgacaatgtctacatcatactagag
tcaagtttggatcttatatacaaatctaaagagtcttataccattcagggtaaaagaaag
ggatctgatttaaaagggaaaaggtacgagcctccttttccgtacttcctacatttgagg
aacaacggagcttttgtggtgttaaatgatacgtacgttacggcagaatctggtacagga
attgttcaccaagcaccatactttggggaagatgatcataggtgttgcctggaagctgga
atcatcacgagagaccaagagatcgtatgtcctatcgacagttgtgggcgtttcgtggag
ccggtgcgtgactttgttggaaagtacgtaaaggatgctgataaggatattatcaagtat
cttcaagccaacaagagattagtctacagtggatctacgaagcacagttatccattttgt
tggagatctgatacacctttaatatacaaagcagtgccctcgtggtttataagagttgaa
tctataaaggagaagctgatcgcagtgaacagcagcacttactgggtgccagactatgta
aaagagaaacggtttggtaactggttgagagacgctcgggactgggctgtcagtaggaat
cgttattggggtaatccgatcccgatatggatttcagaagacggacaagaaatcgtgtgc
gtaggaagcatcgcagagttagaggaattaacgaacacgaaaataacggacattcataga
gagagtatcgatcatttgaccataccatcgaagcgcccggggtgcccgccgctgcgacgc
gtacccgaagtattcgattgttggttcgaatctggctcgatgccgtacgcccaaatgcat
tatcctttcgagcatcgaagagaattcgaagaaagtttcccagccgatttcattggggaa
ggtatcgatcaaactcgtggatggttttacacacttttagttatatcaacagctctcttt
gggaaagctccgtttaagaatcttgtagccaacggtctgatacttgcgtctgacggacag
aaaatgtcaaaacgcaagaagaattatccagaccctatggaaattatcaataaatacgga
gcggacgctcttcgtttgtacttaatcaattctcccgttgtaagagcggagaatctgcga
tttaaggaggagggagtcagggatgtcataaaggatgtatttctcccgtggtacaatgcg
tttcgatttttaatgcaaaacgtcgagagatttgaaagagaagagaaagttaatttcgtg
tatgacgattctcgaggtgtatactccgataatataatggatagatggatcctgtctttc
acgcagactttgttacaatcttttaaacgagaaatgcaagcttacaaactgtacactgtg
ataccgcacttggtaaaatacatagataatcttactaattggtatgtacgaatgaataga
agacgtataaaaggggaaggcgattcgaccgattgtcaacaagcattgacaacgttattc
tctgttctttatacaatagtatgcgtgaatgcaccgttcacaccgtttttaacagaattc
atgttccagcgcctggtgaaattacttcctccgataaagggtaacatggacagtgtacac
tatcaaatgataccagaatctaatccgcagttgatagacgagaagattgaaagtgccgta
tcttacatgcagactgtgattgagctcggacgtgtagtaagagacaggaagaccattccc
gtcaaatatccattgccgaaagtaatagtgattcatcaagatcctaaagtattgaaggaa
ctcgaaacattaaagtcttatatcctggaggaacttaacgtgaaagagttgatagttacc
acagataagaacaagtacggtgttaaactgcgggccgagccagatcacaaaactcttgga
gcacgtctcaagggggaattcaaatccgttactcaggctattaaagaacttgacgatgaa
caattacaagtatttatcgcgcagaaggagatcacggtgcaaggtcataaattggaagag
caagatttacgattgatgttcagttttaccgggccagctgcggaacagctgtctaaacag
tatgaagctcatagcgaaggaaacgttctaattctgttggacgttacacccgacgaaagt
atgcataatgaaggaatagcgagagaagtaattaatcgcgtacagaaacttaggaaggaa
gctcagttggttccatcggacgaggcaatcgcgtattacaagatacaagatcaagacagc
aatttagctaaagtaatcgttagtcacaaagagttgatcgagaatgggaccaagacccgg
gtagaagatgtaacgaaaatgtcaagtgaggctaatataattattaggaagatgcagaaa
attaaaggcatagacatggatcttattttagtgaatcctgggatgggtcagattaagaac
gacgaatcgattgtagaaccgtttttgaaatacgcgaacgttgaacttgcaggcatgaaa
ccaagattcggtgcgactagttgtacgggtactgtattattagaaatcccaaattcgcca
gcctctatctcttacgagcagttgaaacacgagatcgagttaatattcggtatttacggc
tgtacctatgatttgtatgcaggcaataaattaatatcgcaggagacgaacatttcgtcg
ttgcataaacaaacgataagaatagtgaaggcaggttcaattgtgagaccagtgtccgcg
gagcaagaggtgccggtctgtaaatttgttaacgttaacagtatttcgggaagaggtact
attcttttggagaatccaaaggggagtttcaatttagacgacacgatgttgaagcaacga
ttaaacattttatttaaaacatccaacttgactaaactcgtgccgaagctggtgaacgag
ttacacggaaagacacttgaattaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system