KEGG   Ceratina calcarata (carpenter bee): 108624097
Entry
108624097         CDS       T06061                                 
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
  KO
K17589  RB1-inducible coiled-coil protein 1
Organism
ccal  Ceratina calcarata (carpenter bee)
Pathway
ccal04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108624097
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccal01009]
    108624097
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccal04131]
    108624097
   03029 Mitochondrial biogenesis [BR:ccal03029]
    108624097
Protein phosphatases and associated proteins [BR:ccal01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108624097
Membrane trafficking [BR:ccal04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    108624097
Mitochondrial biogenesis [BR:ccal03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    108624097
SSDB
Motif
Pfam: ATG17_like ATG11 TBK1_ULD ubiquitin
Other DBs
NCBI-GeneID: 108624097
NCBI-ProteinID: XP_017878640
Position
Unknown
AA seq 1360 aa
MLYIFHVDSGTTITFDIKLALQTVSQLKEAIERECGVVAANQVLLMSGGESLDPSARVCS
YSAGTDTNPIYLFSTSAIESHVPPTSCIDYGSDFDLQNQIDASLVMPATYQTIVARAQLA
QQCYGLAREQTRICERLVHDQHLQQQGWAAVVANLEDLTHLFQSRADILQQTYTAYLSER
QQHIDLLANFSHDLDTLSKIPLLPALRAQAEGLLSPDEQPSQSENDSEGRKEVLNLLRWI
SVKDNQSNLEQVVDYCTRGLGQYDERVMEALKTEVNIVLDSANKQDMKEIKGLGERLFAL
EQLMIQTKKLVQVQGELTQGFLQNQSRANNLGDASILPDLCALHRRQLLVMQQNHNKLRD
IRRRCTKAKEELSVNIYHRLKWIMYVENKMKEMDRKLVMYHESLKRIRRYLEVLQQIHLA
PQMYMNAVAEVVRRRTFSQAFLVWASNLACQLLTVHSEELTRRREFQSKFDGHFLNLLFP
GLEDTPPPFATQAPSVFDNGLPKLTVEDIESLRSQLPDLALTISSPDLISITQFFLSKSL
TEASTEGNKEKDSTSMRVDVAVKDQDQTTAPMLFDRGGFESETDTEEFEKIGQGAADSKP
ESYDGVKQMRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTNRSSSSSEPGSFHFPSL
SVSERPAQLSPLTECAENGESSCLHRATTTNGFPSNKYNHEAPSATMEDEPNSSLSPNPP
CSPLSRSVMCDGQQQQCHQLSGSGGSSPSVGVGATDFVGTEFYMDESLPSSLSEHPADGH
HQAIVSLLQENLGNTREEVERLRTIVKTMKALVGESLTTLRQELSVLRDRSDEEMCGSSK
MIDRIREVLSLYSCECDRRVREREQELTVDHELEMTDVKKLIESREEEIRTLKRDLLEKE
TELAEYERLMATMRSKLENEQDENRDLKARMEEALNDQQRLVKEATDKLQIEYKAELESI
RSRFKLMAASTCAMERSPSDSSLEKIDKPDFIELVNHAFGHSMQESKLDKSVTLRSVEKE
CGDCISKLVHELRIATQVFEEKVRDVEMYRKREMVLTEECKRYKNTIKQLMKSESYSSAL
VDSGLHKESSDEQLKMSQTSLEEVAKSLEPDKDEVEVSESKKVRLETTDDSYCMSRRMEM
LENENKRLNSELKSLRESKQTADAKIEILEADTMRLEVELVKERYKYFITPDSSSSSESR
DKDTSASVAMASKSVIRRDAATSTGPLRRCTCTTCLTRIQKRAKKFADKLVELGHITVTR
CNPGDHVLMFWDPNYWTYMLYQESMTMYFLNSDCLAPGIDIMPDGTPRPTQHIVQVIDKQ
YCHARKSENRYRVPSGTKFYQVNVELVKESAAILSSIQQK
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgctctacatattccacgtggactccggcaccaccatcactttcgacatcaagttggcg
ctacaaactgtctcccagctgaaggaagcgatcgagagagaatgcggtgtggtcgcggcg
aaccaggtgctcttgatgagcggaggcgaaagcctggatccgtcagcgcgtgtgtgctcc
tactcggccggaaccgacacgaacccgatctatttgttcagcacgtccgccattgagagt
cacgttccacccacgtcgtgcatagattacggttctgatttcgatctccaaaaccaaatc
gatgcatccttggtgatgccagccacttatcagaccatcgtcgcccgcgcccaattggct
cagcaatgctatggattggctcgggaacagaccaggatttgcgagaggctggtgcacgat
caacatcttcagcaacagggctgggcggccgtagtggccaacctcgaagacctcacgcat
ttgttccagtcacgagctgatattctgcaacagacctacaccgcgtacctttctgaaagg
cagcaacacatagatctgctcgcgaacttcagccatgacttggacactttatcgaaaatt
ccgcttctaccagcgttgagagcacaggcggagggtcttctgagtccagatgaacagcca
agtcaatccgagaacgattccgaaggcaggaaggaagttttaaatctacttcggtggata
tcggtgaaagacaatcagagcaatttggaacaggtggtggactattgtacgcgaggactc
ggccaatacgatgagagagtaatggaagcgctgaagactgaggtgaatatagtcctagac
agcgcaaacaagcaggacatgaaggagatcaaaggacttggcgaaaggttgttcgcgttg
gaacagcttatgatacagacgaagaaactggtccaggtacaaggggaattgacccagggt
tttctgcagaaccagagtcgggcgaacaatctgggcgacgccagcatcctgccagatctt
tgcgccttgcacagacgtcagctccttgtgatgcagcagaatcacaataagctaagagac
atcaggcgcaggtgcaccaaagcgaaagaggaattgtccgtcaacatctaccatcggtta
aaatggatcatgtatgtggagaacaagatgaaagaaatggacaggaaactcgtcatgtat
cacgagagcctgaagcgcatcagaagatacctcgaggtgctacaacagatacacctagct
ccgcaaatgtacatgaacgccgtggccgaggtagtccggcgacgaacgttctctcaagct
ttcctggtctgggctagtaatcttgcgtgtcagctgctgacggtgcatagcgaggagtta
actcgtagaagggaattccagagtaaattcgatggccacttcctgaacctgctgtttccg
ggtttagaagacacgccgccgccgttcgctacacaggcaccatctgtttttgataacgga
ctcccaaagttaacggtggaagatatagaatccttaaggtcgcagctacctgatctggcg
cttaccatctcgtcaccagacttgatcagcatcacccaattcttcctgtcaaaaagtctt
accgaggcgagcaccgaggggaataaagagaaggacagcacctccatgcgtgtcgacgtg
gctgtcaaagaccaggatcaaactacagctccgatgttatttgacaggggtggtttcgaa
tcggagactgacacggaggagttcgagaagatcgggcagggcgccgccgactctaaaccg
gaatcgtacgatggtgtgaaacaaatgcgtcagaagcaattggaggttggtgcctcgaga
agcgtatcccccgcatcctcgacctcgactaacgtgtccccgcttaactcgaaagtcgcg
gacctgacgaaccggtcatcctcctcgagcgagcccggatccttccactttcccagtcta
tccgtcagcgagcgtccggctcagcttagcccattaacggagtgcgccgagaacggcgag
tccagttgtctccatcgcgctaccactacgaacggttttccgagtaataaatacaatcac
gaagcgccatcggcgacgatggaagacgagccgaactcctccctaagtccaaatcctcca
tgttcacccttgtcacggtccgtgatgtgcgacggccagcagcaacaatgccatcagctg
tctggcagtggcggtagcagtccttccgttggagtaggcgctaccgacttcgtgggtact
gagttttacatggacgagtccctgccgagcagtctcagcgaacatcccgccgacggccat
catcaggctatcgtttcccttctccaggagaatcttgggaacacgcgcgaggaagtggag
agactccgtacgatcgtgaagacgatgaaggcattagtgggcgaatcgttgacgacgctc
agacaagagctgtccgttctcagggatcgttctgacgaggagatgtgcggttcctcgaag
atgatcgacagaattcgcgaggtgctgtcgctgtattcgtgtgagtgcgatcgtcgggtt
cgcgaacgcgagcaagaactgacagtggatcacgaactcgagatgacggatgtgaagaag
ctgattgagagtcgggaagaggaaatacgtacgctgaagagagatcttctcgagaaggaa
actgaattagccgagtacgagcgactgatggctaccatgcgtagcaaactggagaacgaa
caagatgaaaacagagatctgaaggcacgcatggaggaggcgctgaacgatcagcagagg
ctggtgaaggaggcaacggacaagctgcagatagagtacaaggctgagttggaatcgatc
aggagtcggttcaagctaatggctgcctccacctgcgccatggagagaagtccgagtgat
agtagccttgagaagatagacaaaccagattttattgagctcgtcaatcatgcgttcgga
cactcgatgcaagaatcgaagctggataaatctgtgacgttacgatctgtcgagaaagaa
tgcggagattgtatatcgaagctggttcacgagctgcgcatagcaacgcaagtgtttgag
gagaaagtcagagatgtagagatgtatagaaagagagaaatggttcttacggaggagtgc
aaacgctacaagaacacgatcaaacaactaatgaaatcggagagctacagctccgctctc
gttgactctggcttgcacaaagagagcagcgacgaacaactgaagatgagtcagacgagt
ctggaagaagtagcgaagagtttggaaccggacaaagacgaggtggaagtatccgaatcg
aagaaagtacggttggaaactaccgatgattcatactgcatgtctaggagaatggagatg
ctcgaaaacgagaacaaaagactcaactccgagttaaaatcgctgcgtgagagcaaacag
acggccgacgcgaagatcgagatcttggaagcggacacaatgcgattggaggtcgaatta
gtaaaagaacgatataagtacttcataactccagattcatcctcctcgtcggagagccgc
gataaggatacgagcgcatccgtggcgatggcttcgaaatcggttatacgtcgggacgcg
gctacgagtactggaccattacgtcgatgcacctgcacaacctgtttgacgcgcatccag
aagagggcaaagaaattcgcggataagctcgtggaactcggtcacatcaccgtgactaga
tgcaatccgggcgatcacgtgctgatgttttgggatccgaactactggacctacatgctg
taccaggaatcgatgacgatgtatttcctcaattcggactgcctagcccccggcatagat
ataatgcctgacgggacaccgaggcctacccagcacatcgtccaggtcatagacaagcag
tactgtcacgctagaaagtccgagaatcggtatcgcgtaccaagcggcaccaagttctac
caagtgaacgtggaactcgtgaaggagagcgcagctatattatctagtattcagcagaag
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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