KEGG   Castor canadensis (American beaver): 109682236
Entry
109682236         CDS       T04791                                 
Symbol
Polr3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03020  RNA polymerase
ccan04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109682236 (Polr3a)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109682236 (Polr3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccan03021]
    109682236 (Polr3a)
Enzymes [BR:ccan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109682236 (Polr3a)
Transcription machinery [BR:ccan03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     109682236 (Polr3a)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 109682236
NCBI-ProteinID: XP_020012952
UniProt: A0A8B7U1E5
Position
Unknown
AA seq 1390 aa
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLHGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKQQFLDYLKRPGLTYLQKRGLKKKISDKCRKKSTCHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVESLLGRAQENLNPLIVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWXRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDIHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTFKDTFFDRAKACQIIASILVGKDEKIKVHLPPPTILKPVTLWTGKQI
FSIILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQNEPALSKNELTLTTESIMKKNEFLC
CQDSFLQEIKKFIKGVSERIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPDPPRRPLIFD
TSEFHIPLVT
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggtgaaggagcagttccgggagacggatgtggccaagaaaataagtcacatctgtttt
ggaatgaaatctcccgaggagatgcgccagcaggcacacatccaggttgtgagtaagaac
ctatacagccaggacaacaatcatgcccccttgctgcatggggtgcttgaccacaggatg
ggcacaagtgaaaaggaccgtccttgtgaaacctgtgggaaaaacttggctgactgccta
ggccactatgggtacattgacttggagttaccatgctttcatgtggggtacttcagagct
gtcatcggcatcttacagatgatctgcaaaacctgctgccacatcatgctgtcccaggag
gagaagcagcagttcctggattacctaaagaggcccggcctgacgtacctccagaagcga
ggcctgaagaagaaaatctctgacaagtgccggaagaaaagcacttgccaccactgtggt
gcatttaatggtactgtaaagaagtgtggcttactgaagataattcatgagaaatacaag
actaacaaaaaagtggtggatcccattgtatcaaatttccttcagtcctttgaaacagcc
attgagcataacaaagaagtagagtccctgctgggaagggcacaggaaaacttgaatccc
ttaatagttctgaacttgtttaaacgaatcccagctgaagatatccctctacttctgatg
aatcctgaagctggaaagccctctgatttgattctcacacgacttttggtgcctcccttg
tgtatcagaccatccgttgtgagcgatttgaagtctggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcggatctcagga
gccaagacacagatgatcatggaggactgggatttcctgcagctgcagtgtgccctctac
atcaacagcgagctgtcaggcattcccctcaacatggcgcccaagaagtggnaccgtggt
tttgtacagcgcctgaaggggaaacagggtcgctttagaggcaatctgtcaggaaaaaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccggattgatgaagta
gctgtaccagttcatgtagccaaaattctaacttttcccgagaaagtaaacaaagcaaac
attaattttttgagaaaactggttcgaaatggccctgacattcatccaggagctaatttc
atccaacaaagacatatgcagatgaaaaggtttttgaaatatggaaatcgggaaaagatg
gctcaggagctcaagtacggtgacattgtggagagacacctcatagatggagacgtggtg
ctgtttaatcggcagccctcactgcacaaattgagcatcatggctcatctggccagagtc
aaaccccaccggaccttcagatttaatgagtgtgtctgcaccccctacaatgcagacttt
gatggtgatgaaatgaaccttcatcttcctcagacagaagaagccaaagccgaggccctc
gttctcatggggactaaagcaaatcttgtaactccaaggaatggggaaccactcattgct
gctattcaggattttctaacaggtgcctacctccttactttcaaggacactttctttgac
cgagccaaggcttgccaaatcattgcttcaatattggttggcaaggatgagaaaattaaa
gtgcacctcccaccccctacgatattaaagcctgtcaccttgtggactggaaagcagatc
ttcagtattatccttcgacctagtgatgacaatccagtgagggccaacctccgaaccaag
ggcaaacagtactgtggcaagggggaagacctctgcgtcaatgactcctatgttacaatc
cagaacagtgagttgatgagtggtagtatggacaaaggaacgctgggatcaggatccaag
aacaatattttctacattttgctacgagactgggggcagaatgaagccgctgatgcaatg
tcacggcttgccaggctggctcctgtctacttgtctaaccgcgggttctcaattgggatt
ggtgatgtcacacctggccagggactgttgaaggctaagtatgagttactgaatgctggc
tacaaaaaatgtgatgagtacattgaagccctgaacactggcaagctgcagcagcagcct
ggctgcactgctgaggagacgctggaggccctgatcctgaaggagctatctgtgatccgt
gatcacgctggcagcgcctgcctccgagagctggacaagagcaacagccccctcaccatg
gccctgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgcgtggga
cagcaagccatcagcggctctcgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctcccagctgccaaaggctttgtggctaatagcttttattct
ggcttaacaccaactgagtttttcttccacacaatggctggccgggaaggtctagtcgac
acagccgtaaagactgctgaaacaggatacatgcagagaaggctggtcaaatctctggaa
gatctctgttcccaatatgacctgacagtccgaagctccactggtgatatcatccagttc
atctacgggggagatggcttagatcctgcagccatggaggggaaagatgaacctttggaa
tttaaaagggttctggacaatatcaaagcagtattcccatgtcagaatgagcctgctctc
agtaaaaacgaactcaccctgaccaccgaatccatcatgaagaagaacgagttcctctgc
tgccaggacagcttcctgcaggaaataaaaaagttcattaagggggtttctgagaggatc
aagaaaaccagagataaatatggcatcaacgataacggcacaacagagccccgtgtgcta
taccagttggaccggatcacccccacccaaatagagaagtttctggagacctgtagggac
aagtacatgagggcacagatggagccaggctctgcagtgggtgcgctctgtgcacagagc
attggtgagccaggcacccagatgaccctgaagactttccattttgcaggtgtggcctcc
atgaacatcacactgggtgtgcctcggatcaaagagatcatcaatgcttccaaggccatc
agcactccaattatcacagcacagctagacaaggatgatgacgcggattatgcccgcctc
gtgaaaggcagaattgagaaaaccctccttggggagatttcagagtatatcgaagaagtg
tttcttcctgatgactgctttattcttgtcaagctctccctggaacggatcagacttttg
agactggaagtgaacgctgagacagtgcgttactccatctgcacatccaaactccgtgta
aagcctggcgacgtggctgttcatggggaggctgtggtgtgtgtcacccctagagaaaac
agcaagagctccatgtactacgttcttcagtttctgaaagaggacctccccaaggtggta
gtgcagggcatcccagaggtgtccagagctgtcatccacatcgacgagcagagtggaaag
gaaaagtacaagcttctggtggaaggtgacaatctgcgggcagtgatggccacccacggt
gtgaaaggcacccggaccacctccaataacacttacgaggtggaaaaaactctgggtatt
gaggctgcccggacaactatcatcaacgagatccagtacacgatggtcaaccacggcatg
agcatcgacaggaggcacgtgatgctgctctctgacctgatgacctacaagggtgaagtt
ctgggcatcactaggtttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagactgctgatcatctctttgatgctgcctactttgggcagaaggactccgtg
tgcggggtgtccgagtgcatcatcatgggaatcccaatgaacattgggactgggctcttc
aagttgctccacaaggccgacagggacccagatcctcccaggaggccgctgatctttgac
acaagtgaattccacatcccccttgtcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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