KEGG   Castor canadensis (American beaver): 109685056
Entry
109685056         CDS       T04791                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial-like isoform X1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccan03016]
    109685056
   03029 Mitochondrial biogenesis [BR:ccan03029]
    109685056
Transfer RNA biogenesis [BR:ccan03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    109685056
Mitochondrial biogenesis [BR:ccan03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    109685056
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1 MNE1
Other DBs
NCBI-GeneID: 109685056
NCBI-ProteinID: XP_020017316
UniProt: A0A8B7UCP3
Position
Unknown
AA seq 706 aa
MDLMRLARLFSGPRPMGLSIHRYLDPHGARWTRDEQELAWLRAMWPARPGSLSFSSSSSQ
LPLGQRSQKNTSSLPCDLSQPGLPSSEKDEDEEHFGTLSDKYSSRRVFRKSTAQLYNLRL
WQQSVDGDEGELEPRPWQGRRNTPYWYFFQCKRLIKAGKLAEALDLFERQMLKEEQLQPL
ECNYTVLIGGCGRVGYLKKAFRLYSDMKKRDLEPSDATYTALFNVCAESPWKDSALQSAL
KLRQQLSARNFQLNLKTYHALLKVAARCADLRMCLDVFKEIVHKGHAVTEETFNFLLMGC
IQDKKTGFRHALQVWRQMLSLGLKPSRHGYNLLLGAARDCGLGDPEVASRLLLRPQEEML
LLQSPASRWRAGSRGQPRSGDGVSATLHVEVLERQLFLEPSQELEEPPEARLPTKAHINV
GTEPKPGHTAALTPLAMKPPPLELDVNLLALGTVSPTVVSFGTVATPADRLALMGGLEGF
LGKMVEHGLHPDIKTLTLLAEVVEPGSPAETSLLAALDRYQVEADVTFFNTLMRKKSKLG
DLEGAKALLPVLAKRGIVPNLQTFCNLAIGCRSPRDGLQLLADMKKSQLNPNTHIYSTLI
NAAIKKLDYAYLIDILKDMLQSRVPVNEVVIRQLEFAAEYPPTFDRYKGKNTYLEKIDGF
RAYYKQWLKVMPAEETPHPWQEFRTKPKGNRDTIGDAGVNGGHGSR
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggacctcatgagacttgctcggctcttctctggccctcgccccatgggactgtccatc
caccgataccttgacccccatggagcccggtggacaagagatgagcaggaacttgcatgg
ctgagggccatgtggccagctcggccagggtcactgtccttcagcagctcttcctctcag
ctgcctctgggtcagaggagccagaagaacacaagcagcctcccttgtgacctgagccag
cctggcctgccatcctctgagaaggacgaggatgaggagcacttcgggaccctctccgac
aagtactcctcccggagagtgttccggaaatccacagcacagctgtataacctgcggctc
tggcagcagagtgtggatggggatgaaggggaactggagcccagaccctggcaaggccgg
aggaacactccgtactggtacttctttcagtgcaagcgcctgatcaaggcgggaaagctg
gccgaggccctggacctgtttgagaggcagatgctgaaagaggagcaacttcagccgctt
gagtgcaactacaccgtgctgatcggcggctgcgggcgcgtgggctacctcaagaaggcc
ttcaggctctacagcgacatgaagaagagggacctggagccctcagatgccacatacaca
gccctgttcaatgtctgtgccgaatccccctggaaggactctgctcttcagagcgccctg
aagctccgacagcagctcagtgccagaaacttccagctcaacctgaaaacataccatgcc
ctactgaaggtggctgccaggtgtgcagacctcaggatgtgcctggatgtgttcaaggaa
atcgtccacaagggtcacgcggtcactgaggagaccttcaatttcctgcttatgggttgt
atccaggacaagaagacaggcttccggcacgccctgcaggtgtggaggcagatgctgagt
ctggggctcaagccaagtcggcatggttacaacctgctgttgggggcagcccgtgactgt
ggccttggggacccagaggtggcctccaggttgctcctgaggccccaggaagagatgctc
ctgctccagtcaccagcaagcaggtggagggcagggagcaggggccagcccagatcaggt
gatggtgtgtcagccacactgcatgtggaggtcctggaaaggcagctgtttctggaaccc
tctcaggaacttgaggagcctcctgaggccagattacctaccaaggcccacattaatgtg
ggaactgagccaaagcctggccacacggcagccctcaccccactggccatgaagccacct
cccttggagctggacgtcaacctcctggcccttgggactgtctcccctactgtggtctcc
tttgggacagtggccaccccagctgacaggctggccttgatgggaggcctagaaggcttc
ctgggcaagatggtggagcatggtctccacccagacatcaaaaccctcaccctgctggcc
gaggttgtggagcccgggagccctgcggaaacctcactgctggccgccctggacaggtac
caggtggaggctgatgtgaccttcttcaacacactgatgaggaagaagagcaagctggga
gacctggagggggcgaaggcgctgttgccagtcctggcaaaaagggggattgttcccaac
ctgcagacattctgcaacctggccattgggtgccgcagccctagggatggactgcagctg
ctggcggacatgaagaagtctcagctgaaccccaacacccacatctacagtacgctcatc
aacgcggccatcaagaagctggactacgcctacctcatcgacatcttgaaagacatgctg
cagagcagagtccctgtgaacgaggtggtcatccgccagctggagtttgctgctgagtac
cctcccacctttgaccgttacaaagggaagaacacctacttggagaagatcgatggcttc
cgagcttattataagcagtggttgaaagtgatgcccgcagaggaaaccccccacccctgg
caggagttccggactaagcccaaggggaaccgagacaccatcggggatgctggtgtcaac
ggaggccatgggagcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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