KEGG   Castor canadensis (American beaver): 109691600
Entry
109691600         CDS       T04791                                 
Symbol
Msh2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan01524  Platinum drug resistance
ccan03430  Mismatch repair
ccan05200  Pathways in cancer
ccan05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109691600 (Msh2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    109691600 (Msh2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    109691600 (Msh2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    109691600 (Msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109691600 (Msh2)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     109691600 (Msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 FeoA
Other DBs
NCBI-GeneID: 109691600
NCBI-ProteinID: XP_020027294
UniProt: A0A8B7V8M5
Position
Unknown
AA seq 936 aa
MAVQPKETLQLEGPAEVGFVRFFEGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKTLQSVVAQLKXLXVLFVKDLLLFVRYRVEVFKELELKXGTKENDWYW
HFKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFP
DNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKAEFSTKDIYQ
DLNRLLKGKKGEQMNSSALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFDLTTFDFSQY
MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEGG
KLNLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI
QALEKYEGRHQALLLAVFVVPLVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL
SELREVMDNLEKKMQATLSRAARELGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKN
FSTVDIQKNGVKFTNSELSSFNEEYAKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDV
LAQLDAVVSFAYVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDDVAFIPNDVHFE
KDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQ
LKGISTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFC
MFATHFHELTALASQIPIVNNLHVTALTTEETLTMLYQVKRGVCDQSFGIHVAELANFPK
HVIECAKQKALELEEFQNIGASQGRSEMEPAAKRCYLEREQGEKIIQEFLAKVKQVPFTE
MSEENIAKKLKQLKAEVMAKNNSFINELISRIKVTT
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggagacgctgcagctggagggcccggccgaggtcggcttcgtg
cgcttcttcgagggcatgccagagaaaccgactaccacggtgcgcttattcgaccggggc
gacttctacacggcgcacggcgaggacgcgctgctggccgcccgcgaggtgttcaagacc
caaggcgtgatcaagtacatggggccggcaggagcaaagactctgcagagtgttgttgct
cagttaaaatgactttgagttctttttgtaaaagatcttcttctgttcgtcaggtataga
gttgaagtgtttaaggaattagagctgaaataaggcaccaaggagaacgattggtattgg
cattttaaggcttctcctggcaatctttctcagtttgaagacatcctatttggtaacaat
gatatgtcagcctccattggtgttgtgggtgttaaaatgtccacagttgacggtcaaaga
caggttggagttgggtatgttgattccatacagaggaagctgggactgtgtgagttccct
gataatgatcagttctccaatcttgaggctcttctgattcagattggaccaaaggagtgt
gttctaccaggaggagagactgctggtgacatgggaaaactgaggcaggttattcagaga
ggaggaattctgatcacagaaaggaaaaaagctgaattttctacaaaagacatttatcag
gacctcaatcggttgttgaaaggcaaaaagggagaacagatgaatagctctgctttgcca
gaaatggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactc
ttatcagatgattcaaattttggacagtttgacttgactacttttgacttcagccagtac
atgaagttggatattgcagcggttagagcacttaaccttttccagggctctgtcgaagat
accactggctctcagtctctggctgcattgttaaataaatgcaaaacccctcaaggtcag
agactagtcaaccaatggattaagcagcctctcatggataagaacagaatagaaggaggt
aaattaaatttggtggaagcttttgtagaagatgcagagttgaggcagagtttacaagaa
gatttacttcggcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagca
gcaaacttgcaagattgttaccgactctaccagggcataaatcaactccctaatgttata
caggctctggaaaaatacgaaggaagacaccaggcattgttgctcgcagtttttgttgtt
cctcttgttgatcttcgttctgatttctctaagtttcaggaaatgatagaaacaacatta
gatatggatcaggtggaaaaccatgaattccttgtcaaaccttcatttgatcccaatctg
agtgaattaagggaagtaatggataacttggaaaagaagatgcaggctacattatcacgt
gcagctcgagagcttggattggaccctggcaaacagattaaattggattccagtgcacag
tttggatattactttcgagtaacctgcaaggaagaaaaagtccttcgtaacaataaaaac
ttcagtacagtagatatccagaagaatggtgttaaatttaccaacagtgagttgtcttct
ttcaatgaagaatatgctaaaaataaagccgaatatgaggaggcccaggatgccattgtt
aaagaaattgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtg
ttggctcagctagatgctgttgtcagctttgcttatgtgtcaaatggagcacctgtaccg
tatgtacgaccagtcattttagagaaaggacaaggaagaattatattgaaagcgtccaga
catgcttgtgttgaagttcaagatgatgttgcatttattcctaatgatgtgcactttgaa
aaagataaacagatgttccacatcattactggccccaatatgggaggtaaatcaacttat
attcgccagactggagtgatagtactcatggcccaaattgggtgttttgtgccatgtgag
tcagcagaagtgtccattgtagattgcatcttggcacgggtcggggctggtgacagtcag
ttgaaaggaatctccacattcatggctgaaatgctggaaactgcttccatcctcaggtct
gcaaccaaagattctttaataatcatagatgaattgggaagaggaacctctacttatgat
ggatttgggttagcctgggctatatcagactatatcgcaacaaagattggcgctttttgc
atgtttgccacccatttccatgaacttactgcactggccagtcagattcccatcgttaac
aacctacatgtcacggcactaaccactgaagagaccttaactatgctttatcaggtgaag
agaggtgtctgtgatcagagttttggaattcatgttgcagagcttgcaaatttccccaag
cacgtaatagagtgcgccaagcaaaaagctctggagctcgaggagtttcagaatatcgga
gcctcacaagggcgcagtgaaatggaaccagcggcaaagaggtgctatctggaaagagag
caaggtgaaaaaattattcaggaatttctagccaaggtgaagcaagtgccctttactgaa
atgtcggaagaaaacatcgcaaaaaagttaaaacagttgaaagctgaggtgatggcaaag
aataatagttttataaatgaacttatttcacgaataaaggttactacgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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