KEGG   Castor canadensis (American beaver): 109694324
Entry
109694324         CDS       T04791                                 
Symbol
Prpf19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03040  Spliceosome
ccan04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109694324 (Prpf19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109694324 (Prpf19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccan03041]
    109694324 (Prpf19)
   04121 Ubiquitin system [BR:ccan04121]
    109694324 (Prpf19)
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109694324 (Prpf19)
Enzymes [BR:ccan01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109694324 (Prpf19)
Spliceosome [BR:ccan03041]
 Complex B
  Other components
   Prp19 complex
    109694324 (Prpf19)
 Complex C
   Prp19-CDC5 complex
    109694324 (Prpf19)
Ubiquitin system [BR:ccan04121]
 Ubiquitin ligases (E3)
  U-box type E3
   109694324 (Prpf19)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109694324 (Prpf19)
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box PROPPIN eIF2A Cytochrom_D1 RMC1_N zf-Nse Nup160 DUF1830 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 109694324
NCBI-ProteinID: XP_020031769
UniProt: A0A250YJ60
Position
Unknown
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtccctgatctgttctatctccaatgaagtgccagagcatccctgtgtatcccctgtc
tctaatcatgtgtacgagcggaggctcattgagaagtatattgcagagaatggaacagac
cctatcaacaaccagcctctctcagaggagcaactcattgacatcaaagttgctcaccca
atccgtccaaagcctccctcagccactagcatcccggccattctgaaagccttacaggat
gagtgggatgcagtcatgctgcacagcttcaccctgcgccagcagctgcagacaacacgc
caggagctgtcccatgcgctgtaccagcatgatgctgcctgccgtgtcattgcccgtctc
accaaggaggtcactgctgcccgagaagctctggctactctgaaaccacaggctggtctc
atcgtgccccaggcagtgccaagctcacaaccaagtgttgtgggtgcaggtgagcccatg
gatttgggtgagctggtgggaatgactcccgagattatccagaagctgcaagacaaggcc
actgtgcttaccacggaacgtaagaagagagggaagactgtgcctgaggagttggtgaag
ccggaagagcttagcaaataccggcaggtggcatcccatgtggggctgcacagcgccagc
attcctggaattcttgcactggacctctgcccctccgacaccaacaagatcctcactggt
ggggcagataaaaatgtcgttgtcttcgataagagttctgaacaaatcctggctactctc
aaaggccacaccaagaaggtcactagtgtggtgtttcacccatctcaggaactggtgttt
tctgcctctccagatgccactatcagaatttggtcagtcccgaacacctcttgtgtacag
gttgttcgggcccatgagagcgctgtgacaggcctcagcctccatgctactggggactat
ctcctgagctcctctgatgaccagtactgggccttctctgacatccagacagggcgtgtg
ctcaccaaggtgactgatgagacctctggctgctctctcacctgtgcacagttccaccct
gatggactcatttttggaacaggaaccatggactctcagatcaaaatctgggacttaaag
gagcgcaccaatgtggccaacttccctggccactcaggtcccattaccagcattgccttc
tctgagaatgggtactacttggctacagcagctgacgactcctctgtcaagctgtgggac
ctgcgcaagcttaaaaactttaagacgttgcagctggacaacaattttgaggtgaaatca
ctgatctttgatcagagtggtacttacctggcacttggaggcacagatgttcagatctac
atctgcaaacagtggacggagattcttcactttacagagcacagtggcctgaccacaggg
gtggcctttggacatcatgccaaattcattgcttcaactggcatggacaggagcctcaag
ttctacagcctgtag

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