KEGG   Castor canadensis (American beaver): 109695097
Entry
109695097         CDS       T04791                                 
Symbol
Aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109695097 (Aplf)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109695097 (Aplf)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     109695097 (Aplf)
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 109695097
NCBI-ProteinID: XP_020033023
UniProt: A0A250YJE9
Position
Unknown
AA seq 510 aa
MSGGFELQPLDCGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVVGGQLRIKPIHTN
PCFYQSSKKSQLLPMKTNVWHWLHPGDSFSLLANKYIFHVFSTHSKMENDCTLRNSQMLD
EDNIINETSESSVINLPDKTTGASQPERSTEVTKTQTTTTDSVSFIGECTDFSKQQSNPT
QRKRILPAWMLVENLSDKDLSASVISGDKNIIQESGKEGIYKDETPVNVTQQGRKRLISS
ENSESVSAEQDAGKKYKNFDQEKAAISSKKMPESLSTITLSNTDMNTVTTNTQRNKIEVE
EPGKVSEHKVMTKRTPNEEGEAVNCSASCMSVQSKSFPYESQGCRPDSSSDPSSPETLQA
KATELVPQDSEENMVKRTSCMYGPNCYRKNPVHFQHFSHPGDRDYGGLEVVGQDETDGRP
ECPYGASCYRKNPQHKIEYRHSALPVRRVFDEDDGVGQPSECDLNDSFLDEEENEPTDED
SDWEPGKEDEEKEDMEELLKEAKTFMKRKN
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtccgggggcttcgagctgcagccactggactgcggcccccgggtggccctggcgccc
ggggagacggtgatcggccgcgggccgctgctgggaataacagacaagagagtttctaga
agacatgccattctcgaggtggtgggtggtcagcttcgaatcaaaccaatacatacaaat
ccatgtttttatcagtcttctaagaagagccagctcttaccaatgaagacaaatgtatgg
cattggctgcatcctggagatagtttttctttgttagccaacaagtacatcttccatgtt
ttctctacacattccaaaatggaaaatgactgtacattaagaaacagtcaaatgcttgat
gaagacaatataataaatgaaacatcagagtcttctgtgattaatttacctgataagaca
actggtgcctcacagccagaaagaagcacagaagtaaccaagacccagactactaccaca
gatagtgtgtcttttataggtgaatgtacagactttagcaagcaacagtcaaaccctacc
cagaggaaaagaatccttccagcttggatgttagtagaaaatttaagtgataaagacctt
tcagcatctgtcatcagtggagataaaaacataatccaggaaagtggaaaagaaggaatc
tataaagatgaaactccagtaaatgtgacacagcaaggaagaaagcgactaatttcatca
gaaaattcagaaagtgtatcagcagaacaagatgcaggaaaaaagtataaaaattttgat
caagaaaaggcagctatttcctccaagaaaatgccagaatcactttctacaattacttta
agtaacacagatatgaatactgtgacgactaatacacagagaaacaaaattgaagtagag
gaacctggtaaggtttctgaacacaaagttatgactaaaagaacacctaatgaagaaggg
gaggcagtgaattgttctgcgagttgtatgagtgtccaaagcaagtcattcccctatgag
tctcaaggatgccgtcctgattccagctctgatccctccagtcctgagactttgcaggca
aaggcaactgaattggttccacaagattcagaagaaaacatggtgaagaggacatcctgc
atgtatggaccaaactgctacaggaagaatcctgtccattttcaacacttcagccaccct
ggtgatagggattatggaggtttagaagtcgtgggtcaagatgagaccgatggtcggcct
gaatgtccctatggagcatcttgttacaggaagaatccccagcacaagatagaatataga
catagtgcacttcctgtaagaagagtttttgatgaagacgatggtgttgggcaacccagt
gagtgtgacctgaatgacagctttctagatgaggaggaaaatgagccaacagatgaagat
tctgactgggaaccaggaaaagaagatgaagaaaaggaggacatggaagagcttctaaaa
gaagcaaaaacgtttatgaaaagaaaaaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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