KEGG   Castor canadensis (American beaver): 109695592
Entry
109695592         CDS       T04791                                 
Symbol
Col9a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04151  PI3K-Akt signaling pathway
ccan04510  Focal adhesion
ccan04512  ECM-receptor interaction
ccan04820  Cytoskeleton in muscle cells
ccan04974  Protein digestion and absorption
ccan05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109695592 (Col9a1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109695592 (Col9a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109695592 (Col9a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109695592 (Col9a1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    109695592 (Col9a1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    109695592 (Col9a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ccan00535]
    109695592 (Col9a1)
Proteoglycans [BR:ccan00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   109695592 (Col9a1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3 DUF4882
Other DBs
NCBI-GeneID: 109695592
NCBI-ProteinID: XP_020033799
UniProt: A0A8B7VRC2
Position
Unknown
AA seq 921 aa
MKNYWKISVFFFVCSFLGPWASATVKRRPRFPINSNSNDGNELCPKIRIGQDDLPGFDLI
SQFQVDKAASRRTIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPSGLPQEYSFLTTFRMT
GSTLEKSWSIWQIQDSSGREQVGVKINGQTKSVAFSYKGLDGSLQTAAFSNLPSLFDSRW
HKIMIGVEKTSATLFIDCIKIESLPIKPRGQIDVDGFAVLGKLEDNSQVSVPFELQWMLI
HCDPLRPTRETCHELPVRTTPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGIPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGSAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAQGSRGIPGSPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGDKGNTGAPGKPGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGSPGIPGKLGPLGSAGLPGLPGPPGLP
GMKGDRGVFGEPGPKGEQGASGEEGEAGGRGDLGDIGLPGPKGSEGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRGPTDQHIKQVCMRVMQEHFAEMAAS
LKRPDMGASGLPGRPXPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEK
GERGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQAGQRAFSKGPDQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaagaactactggaaaatttcagttttcttctttgtgtgcagtttcctgggaccctgg
gcatctgcgactgtcaagcgccgtccaagattccctatcaattcaaactctaatgatgga
aatgaactctgtcccaagatcaggattggccaagatgacttgccagggtttgacctgatc
tctcagttccaggtagataaagcagcatctagaagaactatccagagagtggtgggatca
actgcattacaagtggcttacaaattgggaaataacgtagacttcaggattccaaccagg
catttatatcccagtggactgccccaagaatattccttcttaactacgttccggatgaca
ggaagcacacttgaaaagagctggagcatctggcagattcaggactcctccgggagggag
caagttggcgtgaagattaacggccaaacaaaatccgttgcattttcatacaaggggctg
gatggaagtctccaaactgcagccttttcaaacttgccttccttgtttgattcccggtgg
cataagatcatgattggtgtggaaaagaccagtgctactcttttcattgactgcatcaag
attgaatccttacctataaagccaagaggccaaattgatgtggatggctttgctgtgctg
ggaaaacttgaagataattctcaagtttctgttccatttgaacttcagtggatgctgatc
cattgcgatcccctgagacccacgagagaaacttgccatgagctgcccgtcagaacaacg
cccagccagactaccgatgagagaggtcctccaggcgagcaggggcctcccgggcctcca
gggccacctggagttccgggcatcgatggcatcgacggtgaccgaggtccgaagggtccc
ccagggcctccgggtcctgcaggagaaccaggaaagccaggagcgccgggcaagcctggc
ataccaggcgcagacggattgacaggacctgatggctcccctggctctgttggaccaaga
ggacaaaaaggagaacctggtgtgcctggatctcgtggatttccaggccgtggcattcct
ggaccccctggtcctcctgggtcagcaggactccctggagaacttggccgtgtaggaccc
attggtgaccctgggagaagaggaccgcctggccctcctggccccccaggacccagtgga
acaattggctttcatgatggagaccctctgtgtcccaattcctgcccacccggtcgctct
ggatatccaggtctaccaggcatgaggggtcacaaaggtgctaaaggagaaattggtgaa
ccaggaagacaaggacacaagggtgaagagggtgaccagggagaactgggagaagttgga
gctcaaggacctccaggagctcaaggtttgagagggatcactggcattgttggagacaaa
ggagaaaaaggtgctcggggcttagatggagaacctgggcctcaaggtcttcctggtgca
cctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaagggagacagaggg
gctcaaggttctagaggaattcctggatcccctgggcccaaaggagacacgggcttgcca
ggtgtggatggcagagatgggatacctggaatgccaggaacaaagggtgagccagggaaa
ccagggcctcctggtgatgcaggattgcagggattacctggtgtacctggaattcctggt
gcaaagggtgttgctggtgataagggtaacacaggtgctccagggaagcccgggcaattg
ggaaattcaggcaaaccgggccaacaggggcctccaggagaggtgggaccccgaggaccc
cgagggcttcctggcagtagaggagaaataggaccagtaggatccccaggcataccaggt
aaactgggacctcttggcagcgctggcctccctggcttacctggaccccctgggcttcct
ggaatgaaaggtgacaggggtgtgtttggagaaccaggtccaaagggtgaacaaggtgcc
tctggtgaagaaggtgaagcaggaggaaggggtgacctgggagatataggattacctggt
ccaaagggatctgaaggtaaccctggggaacctggcttgagaggacctgaaggaagtcgg
ggacttcctggagtggaaggaccaagaggaccacctggaccccggggtgttcagggagaa
cagggagccactggcctgcctggtgtccagggtcctccgggcagaggtccgacagatcag
cacattaagcaggtttgcatgagagtcatgcaagagcattttgctgagatggctgctagc
ctcaagcgtccagacatgggtgcctcgggtcttcctggaaggcctnggccccctggcccc
ccagggccccctggagagaatggtttcccaggtcagatgggaattcgtggcctcccaggc
attaaaggtccccctggtgcccttggtttgaggggacctaaaggtgacttgggagaaaag
ggggagcgcggccctccaggaagaggccccaaaggtttgcctggagctacaggtctccca
ggagacccaggccctgccagctacgggagaaatggccgggatggcgagcgaggcccccca
ggggtggcaggaattcctggcgtgcctggacccccaggacctcctggccccccaggtttc
tgcgagccagcctcctgtaccctgcaggctggtcagcgagcgtttagcaaagggccagac
cagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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