KEGG   Castor canadensis (American beaver): 109702007
Entry
109702007         CDS       T04791                                 
Symbol
Cntn1
Name
(RefSeq) contactin-1 isoform X1
  KO
K06759  contactin 1
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109702007 (Cntn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccan04515]
    109702007 (Cntn1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ccan00537]
    109702007 (Cntn1)
Cell adhesion molecules [BR:ccan04515]
 Immunoglobulin superfamily
  Contactins
   109702007 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ccan00537]
 Others
  109702007 (Cntn1)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 Pur_ac_phosph_N Ig_C17orf99 Sp38 C2-set_2 Big_3_4 Interfer-bind ChitinaseA_N
Other DBs
NCBI-GeneID: 109702007
NCBI-ProteinID: XP_020043037
UniProt: A0A8B7WHE3
Position
Unknown
AA seq 1018 aa
MKMWLLVSHVVIISFTTCLAEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPIYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGTYYCLASNNY
GMVRSTEAILSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIKGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENSYGVIYANAELKILALAPTFEFNPM
RKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
IYTCFAENNRGKANSSGTLVITDPTRIILAPINADITVGENATMQCAASVDPALDLTFVW
SFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQSRTILSDDWKDAKTDPPIIE
GNMEAAKAVDLIPWMEYEFRVVATNTLGIGEPSIPSHRIKTDGAAPNVAPSDVGGGGGSN
RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAF
QVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESY
QIRYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFVEVGACNSAGCGPSSDVIETFT
RKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGASTLSSSLLGLLLPAFGVFVYFEF
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgaaaatgtggttgctggtcagtcacgttgtcataatatcttttacaacctgtctagca
gagtttacatggcacagaaggtatggtcatggagtgtctgaggaagacaaaggatttgga
ccaatttttgaagagcaaccaatcaataccatttatccagaagaatcactggaaggaaaa
gtttccctaaactgtagagcccgggccagccctttcccaatttacaaatggagaatgaat
aacggggatgttgacctgacaagtgatcgatacagtatggtgggaggaaaccttgttatc
aacaaccccgacaagcagaaagatgctggaacatactactgtttggcatcgaacaactat
gggatggtcagaagcactgaagcaatcctgagctttggatatcttgatcctttcccacct
gaagaacgtcctgaggtcagagtgaaagaagggaaagggatggtgcttctctgtgaccct
ccataccattttccagatgatcttagctaccgctggcttctaaatgaatttcctgtattt
atcaccatggataaacgaagatttgtatctcagacaaatggcaacctctacattgcaaat
gttgaggcttctgacaaaggcaattattcctgctttgtatccagcccttctattacaaag
agtgtgttcagcaaatttatcccactcattcccatacctgaacgaacaacaaaaccatat
cctgctgatattgtagtgcagttcaaggatgtatatgcattgatgggccaaaatgtgact
ttagaatgttttgcacttggaaatcctgttcctgacatccgatggcggaaggtcctagaa
ccaatgccaagcactgctgagattagcacctcaggggctgtcctcaagatcttcaacatt
cagctagaagatgaaggcatatatgaatgtgaggctgagaacattaaaggaaaggataaa
caccaggcaagaatttatgtccaagcatttcctgaatgggtagagcatatcaatgacaca
gaggttgacataggaagtgacctctactggccttgtgtggccaccgggaagcccattcct
acaatccgatggctgaaaaatggatatgcgtatcataaaggggaactgagattgtatgat
gtgacttttgaaaatgctggtatgtatcagtgcatagcagaaaacagttatggagtcatt
tacgcaaatgctgagctaaagatcctggctttggctccaacttttgaatttaatcctatg
aggaaaaagatcctggctgcaaagggaggaagggtaataattgaatgcaaacctaaagct
gcacctaaaccgaagttttcctggagtaaagggacagagtggcttgtcaacagcagcaga
atactcatttgggaagatgggagcttggaaatcaataacattacaaggaacgatggaggt
atctatacctgctttgcagaaaacaacagagggaaagctaatagctctggtactcttgtg
atcacagatcccacacgaatcatattggccccaattaacgctgatatcactgttggagaa
aatgccaccatgcagtgtgctgcgtctgttgacccagccctggatctcacatttgtttgg
tcctttaacggctatgtgattgattttaacaaagagaatattcattaccagaggaatttt
atgctggatgccaatggggaacttctcatccgaaatgcccagctgaaacatgccggacgg
tacacgtgcactgctcagaccattgtggacaattcttcagcttcagctgaccttgttgta
cgaggacccccaggtcctccaggtggtctgagaatagaagacattagagctacttctgtg
gcacttacctggagccgtggctcagacaatcatagtcctatctctaaatatactatacag
agcaggaccattctctcagatgactggaaagatgcaaaaacagatcccccaattattgaa
ggaaacatggaggcagcaaaagcagtggatttaatcccatggatggagtatgaatttcgt
gtggtagcaaccaatacattgggtataggagagcccagtataccatcacacagaattaaa
acagatggcgccgcaccaaatgtggctccttcagatgtaggaggcgggggtggaagcaac
agagaactgacaattacttgggcgcctttgtcaagagaataccattatggcaacaacttt
ggttacatagtggcatttaagccatttgatggagaagaatggaaaaaagttacagttact
aatccagatactggcagatatgtccataaggatgaaaccatgagcccttccactgcattt
caagtaaaggttaaggctttcaacaataaaggagatggaccctacagcctcatagcagtc
attaattcagcacaagatgctcctagtgaagccccgacagaagtaggtgtcaaagtccta
tcgtcttcggagatatcagttcactggaagcatgttttagaaaaaatagtggaaagctat
cagattcggtactgggccgcccatgacaaggaggcagctgcacaccgggttcaagtcacc
agtcaagagtactcagccaggctggaaaaccttctgccggacactcagtactttgtggaa
gttggagcctgcaatagtgcagggtgtggaccctcaagtgacgtgattgagaccttcacc
aggaaagcacctcctagccagccaccaaggatcatcagctcagtaaggtctggttcacgc
tacataatcacctgggaccatgttgttgcactatcaaatgaatctacagtgacaggctat
aaggtactctatagacctgatggccagcatgatggaaagctgtactcaactcacaaacat
tccatagaagtccccatccctcgagatggggagtatgtggtagaggttcgagcacacagt
gatgggggagatggtgttgtgtctcaagtgaaaatttcaggtgcatctaccctgtcttca
agtctccttggcttactgctacctgcctttggcgtctttgtctacttcgagttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system