KEGG   Clavibacter capsici: AES38_05350
Entry
AES38_05350       CDS       T05227                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ccap  Clavibacter capsici
Pathway
ccap00300  Lysine biosynthesis
ccap00470  D-Amino acid metabolism
ccap01100  Metabolic pathways
ccap01110  Biosynthesis of secondary metabolites
ccap01120  Microbial metabolism in diverse environments
ccap01230  Biosynthesis of amino acids
Module
ccap_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ccap00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AES38_05350
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AES38_05350
Enzymes [BR:ccap01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AES38_05350
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ALD12430
UniProt: A0AA86GB95
Position
1115690..1117189
AA seq 499 aa
MTANPLAPSWLQPPDDANALDPRVWSRGTSRDDDGALRIAGVRAPELAARFGTPLYVVDE
VDVRGRAAETRAAFEREAAAVGTGARVYYAGKAFLSVEVARWMVEEGLHIDVCSGGELAV
ALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQIVIDSAVEVERVAAAAAAHGRVQPVRL
RVNSGVHAHTHEYLATAREDQKFGITLADAPDLVARIRSHASLSFTGLHAHIGSQIFETD
AFVESARRLLDLHERLLADGAVPELNLGGGFGIAYTSVDRPVPVPEIARRLARIVGDECA
RRGIPVPVIAVEPGRSIVGPSTATLYTVGTVKDVLVTVGGVDGEVAEAESATGDVEDPRV
AAEAETAVRRYVSVDGGMSDNARPALYGADYSVRIASRASTADPALVRVAGKHCESGDLV
VLADYLPGDVRPDDLVAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVIVRGETEADL
LARDLGTPLAASPDVNGAR
NT seq 1500 nt   +upstreamnt  +downstreamnt
gtgaccgcgaacccgctggccccgtcctggctgcagccgcccgacgacgcgaacgcgctg
gatccccgggtctggtcccgcggcacgtcccgtgacgacgacggcgccctccgcatcgcc
ggggtccgcgctcccgagctcgcggcccgcttcggcaccccgctctacgtggtcgacgag
gtcgacgtccgcggccgcgccgccgagacgcgcgccgcgttcgagcgcgaggccgccgcc
gtcggcacgggcgcgcgcgtctactacgcgggcaaggcgttcctgagcgtcgaggtcgcg
cgctggatggtggaggagggcctccacatcgacgtctgctccggcggggagctggccgtc
gcgctcgcggcgggcgcggatccggcccgcctcggcttccacggcaacaacaagtcggtc
gccgagatcgaccgcgcggtgggcgccggcatcggccagatcgtcatcgacagcgccgtc
gaggtggagcgcgtcgccgccgcggccgccgcgcacggccgtgtgcagcccgtgcgcctc
cgcgtgaacagcggcgtgcacgcccacacgcacgagtacctcgcgaccgcgcgcgaggac
cagaagttcgggatcacgctcgccgacgcgccggacctcgtcgcccgcatccgctcgcac
gcgtccctctccttcacgggcctgcacgcgcacatcggcagccagatcttcgagaccgac
gcgttcgtcgagtccgcccggcgcctcctcgacctgcacgagcggctcctcgcggacggc
gccgtccccgagctcaacctcggcggcggcttcggcatcgcctacacgtcggtcgaccgg
cccgtgcccgtgcccgagatcgcccggcgcctcgcccgcatcgtgggcgacgagtgcgcc
cggcgggggatccccgtgcccgtcatcgcggtcgagccgggccgcagcatcgtcggcccc
tccaccgccacgctctacaccgtgggcaccgtcaaggacgtgctcgtcacggtcggcggc
gtcgacggcgaggtcgccgaggccgagtccgccacgggcgacgtcgaggacccgcgcgtc
gccgcggaggcggagacggcggtccgccgctacgtgagcgtcgacggcggcatgagcgac
aacgcgcggccggccctctacggcgccgactactccgtgcggatcgcctcgcgcgcctcc
accgcggatcccgccctcgtccgcgtcgccggcaagcactgcgagagcggcgacctcgtc
gtcctcgccgactacctgccgggcgacgtgcgccccgacgacctcgtcgccgtccccgcg
accggcgcctactgctgggcgctcgcgagcaactacaactggatcggccgcccgcccgtc
gtcgccgtgcgcgacggcgaggcgcgcgtcatcgtccgcggagagaccgaggccgacctg
ctggcgcgcgacctgggcacgcccctcgccgcatcccccgacgtgaacggagcacgatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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