KEGG   Cyprinus carpio (common carp): 109046652
Entry
109046652         CDS       T05134                                 
Name
(RefSeq) poly(A) polymerase type 3-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109046652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109046652
Enzymes [BR:ccar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     109046652
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     109046652
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 DUF4269
Other DBs
NCBI-GeneID: 109046652
NCBI-ProteinID: XP_018919961
Position
43:9469826..9494091
AA seq 738 aa
MPFPITSQVQTAQQTPKHYGITSPISLAQPKEADLVLTQKLIETLRPFGVFEEELELQRR
ILVLGKLNTLVQVWIREVSEAKNIPSSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLSFDGIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKRGLAITDEILLNKAEWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKEEIDKEEFSTIWVIGVVFKKMEGPENLNVDLTFDIQSFTDTVYRQAITSKMFEADM
KITAMHVKRKQLQQLLPKVAIQRSKRKHSSDGLRAMNDGSLDLSVDSDNSMSVPSPTGPS
AAKIARASSPQGCTGTATNTSDLQGKMDNSRGSTLLAAEDGTKPDNVGTSSSNATQKGAA
PLKRPGSPVLHDSEKKPKVDSVQQTPHPSPCLSAGPANKRPASPLGNETSKKVEELSTPE
AKSSGENDGHVAVDPEQSVEVVPSEGESKTETELTVVDTAEKIPPTQITSNADLSDVPIL
PTNPIPVVKNSIKLRLSR
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgccttttccaattaccagtcaggtgcagacagcccagcagaccccaaagcattatggg
atcacttctccaatcagcctggcacaacctaaagaggctgatctggttctcacacagaag
ctgatagagacgctccgacccttcggcgtttttgaggaggagctggagctgcagcggaga
atcctagtgcttgggaagttaaatacattggttcaggtgtggattcgtgaagtcagtgaa
gcaaagaatattccatcatcagtgattgataatgttggtggaaaaatcttcacgtttgga
tcctacagacttggagttcataccaagggtgctgatattgatgctctctgcgtggcaccc
cgtcatgtggagagatcagacttcttctcctcgttttatgagaaattaaaggagcaggag
gaggtcaaagacctgagggcggtggaggaagcgtttgtaccagtgataaagctgtccttt
gatggcattgagattgacatactgtttgcccgactggcactacaaaccattccagaaaac
ctggatttgcgagatgatggcttgctaaagaatcttgacattcgctgcatccggagttta
aacggttgcagagttactgatgaaattcttcacctggtgcccaacatagagaatttcaga
ctgactctaagagccatcaaactgtgggccaaacgtcataatatctactcaaatatcctg
ggttttctggggggtgtatcatgggccatgttggttgcgagaacctgccaactttacccc
aacgctgtggcatccacactggtccataagttcttcttggttttctcaaagtgggaatgg
ccaaaccctgtccttctgaagcagcctgaagactgtaatctcaacctcccagtctgggat
cccagggtaacccccagtgaccggtaccacctcatgccaatcatcacaccagcttaccct
caacaaaactccacttacaatgtgtccacctctactcgggccatcatggtggaagagttc
aagcggggtcttgcaatcacggatgaaatattgctgaataaagcagaatggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagtgca
cagacagagaagcagcacttagagtgggtgggcctcgtggaatcaaagatccgaatcctg
gtgggaaacctggagaagaatgagttcatcacactcgctcatgtgaatccacagtcgttc
cccggaccaaaagaggaaattgacaaggaggagttcagcacaatttgggtaataggtgtt
gtgttcaaaaaaatggagggtccagaaaatctcaatgtggacctgacgtttgacatccag
tccttcacagacacagtttaccggcaggcgatcactagtaaaatgtttgaggcagatatg
aaaatcacagccatgcatgtgaagaggaaacaactgcaacaactactgcccaaagtcgcc
attcagaggagcaagagaaagcattcatctgatggcctgcgtgcgatgaatgatggcagt
ctcgacctctcagttgacagtgacaacagcatgtcagtgccgtcccccacgggcccttcg
gctgccaagatcgcccgtgcctccagccctcagggctgcactgggactgccacaaacacc
tcagatttgcagggaaaaatggacaattcaagaggaagcacgctcctggcagctgaggat
ggcactaagccagataatgttgggacttccagcagcaatgccacgcagaagggtgcagct
ccactaaagcggcccggctcaccagttctgcatgactcagagaagaaacccaaagtggac
agtgtacagcagacccctcatcccagtccatgtttatcagctggccctgccaataagaga
cctgcctcaccccttgggaatgagacatccaagaaagtagaggagctctcaaccccagaa
gcaaagtcctcgggtgaaaatgatggccatgtagctgtggatccagagcagagcgttgag
gtggttccttcagagggtgaatctaaaacagagacagaattaacggtagtggacaccgca
gagaagataccccctacgcagataacatctaacgctgatctgtcggatgtcccgatcctc
ccgaccaaccccatccctgtggtcaagaactccatcaagctgagactcagcaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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