KEGG   Cyprinus carpio (common carp): 109058238
Entry
109058238         CDS       T05134                                 
Symbol
dhx8
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109058238 (dhx8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109058238 (dhx8)
Spliceosome [BR:ccar03041]
 Complex C
  Other components
   Step II factors
    109058238 (dhx8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 DEAD AAA_22 AAA_19 nSTAND3 T2SSE AAA_16 TsaE ABC_tran PhoH Flavi_DEAD Sigma54_activ_2 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 109058238
NCBI-ProteinID: XP_018931002
Position
Unknown
AA seq 995 aa
MAEIGEDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNPSIDGFKTVLVKN
GADFTDSLVSNLLRLIQTMRPPAKASTSKASHSVAKPNGEKDKLKELFPALCRPDNPNTR
TMLDEDDVKVAAKAMKELEMFMPSVSGTEPSSSKHRSETSSSSSKKKRRSRSRSRSRDRD
RDRDRRRRHRSRSRSRSRSNERDRRKRRSRWHSRSRSRSPARGDRDKGSDRWKDKHVDRP
PPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQ
RVKIKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGDGQEESAMRNPDRPTNLNLGH
APEVEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDL
EIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAE
MDSIPTGLNKHWVDPLPDTDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLS
ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQ
PRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLG
QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTI
PGRTYPVEVLYTKEPETDYLDASLYXVSCHCSYQMAEFPLEPMLCKMLIMSVHLGCSEEM
LTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYEN
FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYR
TLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFSPAFFKVSD
PTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggcagaaatcggggaagacgagctcaaaaagcttgaatatttgtctttggtgtctaaa
gtttgtaccgaacttgacaaccatttaggaatcaacgataaggaccttgctgagtttgtt
atcagtcttgctgagaaaaacccaagcattgatggatttaaaacagtgctggttaaaaat
ggagccgatttcacagattccctcgtcagcaatttgcttcgtctcattcaaaccatgcgt
cctcctgcaaaagcatctaccagtaaagcctctcattctgtggctaagccaaatggtgaa
aaggacaagctgaaagagctgtttccagctctgtgcagacctgacaatcctaatactagg
actatgctggatgaggatgatgtgaaagttgctgctaaagccatgaaagagttggagatg
tttatgcccagtgttagtggcacagaacctagcagcagtaaacacagatctgaaaccagc
agcagcagcagtaagaagaagcggaggagcagaagtcgcagccggagcagagatagggac
agagaccgagacagacggagacgccatcgctctcgctcccgttccagatctcgttctaat
gagagagacagaaggaagcgcaggagccgctggcactctcgcagcaggtccaggagtcct
gcacggggagacagagacaaaggctcagaccgctggaaggacaaacatgtggaccgcccc
cctccagaggagccatctgtgggcgatatctacaacggcaaagtcaccagtattatgcag
tttggctgctttgtgcagctggaaggtctcagaaaacgctgggaaggcttggtccatatt
tctgagctcaggagagaaggtcgggtagcaaatgtggcagatgtggtcagcaaaggtcaa
agggtcaaaatcaaggtgttgtccttcactggatccaaaacaagtctcagtatgaaggac
gttgaccaggatactggtgaagatctgaaccctaacaggaggagaaatgttggtggagac
ggtcaggaagagtcggccatgagaaatcctgacagacctacaaacctgaacctgggccat
gctccagaggtagaggatgacacattggaacgcaaaagactcaccaagatctccgatcca
gaaaagtgggaaatcaaacagatgattgctgccaacgtgttgtctaaggaggaattccca
gactttgatgaagagacaggaattctgcccaaagtagatgatgaggaagatgaggacttg
gaaattgagctggtggaagaggaacctccattcctgaggggacacaccaaacagagcatg
gacatgagtcctgtcaagattgtcaagaaccccgatggatctctctcccaagcagccatg
atgcagagtgccctggccaaagagcgacgggaggtgaaacaggcccaacgggaggctgaa
atggactcaatccccacgggcctaaacaaacactgggtggacccactgcctgacaccgac
ggcaggcagatagctgccaacatgaggggcataggtatgatgcccaatgacatcccagaa
tggaagaaacacgcctttggtggcaacaaggcctcctatggaaaaaagactcaactttct
atcctggagcaaagagagagtcttcccatctacaagctgaaagagcagctcattcaggct
gtccatgacaaccagatactaattgtgattggtgagacgggctcaggaaagaccactcag
atcactcagtacctggctgaggctggatacaccacacgggggaagatcgggtgcacacaa
cccagaagagtggcagccatgtctgtagctaaaagagtgtcagaggaatacggttgctgt
ttaggtcaagaggttggctacaccatccgttttgaggactgcacaagtcccgagactgtc
attaagtacatgacggacggtatgctgttaagagagtgtctgattgaccctgatctgggc
cagtatgccatcattatgttggatgaggcccatgagagaaccattcacacagatgtgctc
tttggcctgctcaagaagactgtacagaagcgaactgacatgaagctcatcgtgacatct
gctacgctggacgctgtgaaattctcacagtacttttatgaagcacctatttttactatc
cctggtcgtacatatccagtggaggttttgtacactaaagaacctgagactgattacctg
gatgccagtctctattaagtttcttgtcactgttcctatcagatggcagagtttcctctg
gagcccatgctttgtaagatgttgatcatgtctgtccatcttggctgcagcgaagagatg
ctgaccattgtgtcaatgctttcagtacagaatgtcttctacagaccaaaggacaaacaa
gctctagcagatcagaagaaggccaagtttcaccagcctgagggggaccatctgactttg
ttggctgtctacaactcctggaagaacaacaagttttccaacccctggtgctatgaaaac
ttcatccaggcgcgatctctcaggcgtgcgcaggatatccgcaaacagatgctgggcatc
atggacagacacaagttggatgtggtatcatgcggtaaagccacagtacgtgtacagaag
gccatctgcagtggtttcttccgaaacgcagccaaaaaggaccctcaggaaggttacaga
accctcatagaccagcaggtggtctacatccacccctccagcgcattgttcaatcgccaa
ccagaatgggtggtgtatcatgagcttgtgctgaccaccaaggagtacatgagggaggtg
accaccattgacccgaggtggcttgtagaattttctccagctttcttcaaagtctctgat
cccacacgcctcagcaaacagaagaaacagcagcggttggagcccctttataaccgctac
gaggaaccaaatgcttggagaatatccagagccttcagacgacgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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