KEGG   Cyprinus carpio (common carp): 109072673
Entry
109072673         CDS       T05134                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04010  MAPK signaling pathway
ccar04060  Cytokine-cytokine receptor interaction
ccar04150  mTOR signaling pathway
ccar04210  Apoptosis
ccar04217  Necroptosis
ccar04350  TGF-beta signaling pathway
ccar04620  Toll-like receptor signaling pathway
ccar04621  NOD-like receptor signaling pathway
ccar04622  RIG-I-like receptor signaling pathway
ccar04625  C-type lectin receptor signaling pathway
ccar04920  Adipocytokine signaling pathway
ccar05132  Salmonella infection
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109072673
   04350 TGF-beta signaling pathway
    109072673
   04150 mTOR signaling pathway
    109072673
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109072673
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109072673
   04217 Necroptosis
    109072673
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109072673
   04621 NOD-like receptor signaling pathway
    109072673
   04622 RIG-I-like receptor signaling pathway
    109072673
   04625 C-type lectin receptor signaling pathway
    109072673
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    109072673
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109072673
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109072673
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccar04052]
    109072673
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109072673
Cytokines and neuropeptides [BR:ccar04052]
 Cytokines
  Tumor necrosis fators
   109072673
Glycosaminoglycan binding proteins [BR:ccar00536]
 Heparan sulfate / Heparin
  Cytokines
   109072673
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 109072673
NCBI-ProteinID: XP_018944444
UniProt: A0A9Q9V6L6
Position
Unknown
AA seq 237 aa
MMDLESQLLEEGGLLPLPQVMVSRRKSGSSKSGVWRVCGVLLAVALCAAAAVCFTLNKSQ
NNQEGGNALRLTLRDHLSKANVTSKAAIHLIGAYEPEVSTKTLDWKKNQDQAFTSGGLKL
VEREIIIPTDGIYFVYSQVSFHINCKTNMTEDHDLVHMSHTVLRYSDSYGGYMPLFSAIR
TACAKVSNSEDQWYNTIYLGAAFKLRAGDRLCTKTKEELLPSVETGDGKTFFGVFAL
NT seq 714 nt   +upstreamnt  +downstreamnt
atgatggatcttgagagtcagcttcttgaagaaggaggattgctgcccttaccgcaggtg
atggtgtcgaggaggaagtccggctcgtcaaagtcaggcgtctggagggtgtgtggggtc
ctgctggctgtggccctgtgtgccgccgccgctgtctgcttcacgctcaacaagtctcag
aacaatcaggaaggcggaaatgcgctgaggctcacattaagagatcatctttcaaaagca
aatgtcacttccaaggcagccatccatttaataggtgcatatgaacctgaagtgtctaca
aaaaccctggactggaaaaagaaccaggaccaggctttcacttcaggcggcttgaaatta
gtggaaagggagatcatcattcctactgacggcatttacttcgtctacagccaggtgtct
ttccacatcaactgcaagactaacatgactgaggaccacgatcttgtgcatatgagccac
actgtgttgcgctactccgattcctatggcggctacatgccactttttagcgcaatccgc
accgcgtgcgcgaaggtgtcaaacagtgaggatcagtggtacaacacgatttatctcggc
gcggccttcaagctgcgagctggagacaggctgtgcaccaaaacgaaggaagaactcctg
ccgagcgtagaaaccggtgacggaaagaccttctttggggtgtttgctttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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