KEGG   Cyprinus carpio (common carp): 109075571
Entry
109075571         CDS       T05134                                 
Symbol
rnf169
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF169
  KO
K20805  E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109075571 (rnf169)
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109075571 (rnf169)
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     109075571 (rnf169)
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    109075571 (rnf169)
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     109075571 (rnf169)
SSDB
Motif
Pfam: zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-RING_4 zf-RING_10 zf-RING_5 Mitochondr_Som1
Other DBs
NCBI-GeneID: 109075571
NCBI-ProteinID: XP_018947008
UniProt: A0A9Q9V868
Position
Unknown
AA seq 608 aa
MKMAALGSAKSAGLGQRSAPLSLEEARCPVCSEILLEPVTMPCGHSVCLHCFQRTVKLTS
LCCPLCRLRVSSWARKQSREKSLVNAELWELIRLSHPERCKRRMEQRDGQTADGEIFRAP
VPIHKSGEMRQEYEKQKMKGGSSEETEERKKKIHRKEECGMLKLCQYPFCGVSDSENEKP
VGKRTRHVSAFVRKTRCSPAFSRGCLHSSAVQRSRSCTDSEDGRGKTRGHTHHVVPDKAI
ITHSYNAGILLSSENSRSFSAPVLSLDKRHHWRGIHTSSASLILQTKPERSISPESNDSI
SEELNHFKPIVCSPCTPPKRLPDGRLLEPTIVKSTPRNLTRSLHKSTSYEASPTILQKWK
QIEVDRHCIKVTSKGTVTSPIAEDLSLKLSSVEEQDSQICSCAVAKDSSQDHQCICDSSA
KDRKDKPVVCNKRRLVFDQCTQEEASAHISSATQIISDASSAKRRSRCEXNSVSGHCNQG
TKDPENFVNEPTTRSCVHNRPTSRRGKKRSHKTKHLEDTLQTKMSRKGAYDRLDHMIVQR
INREKEDRELALKLQRQFDRECQKVDRHKTSRNKYELRSWATNDGMVGHNTRRSGRISKR
NEHFNYSC
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgaagatggcggcgctggggtccgccaaatccgctggactgggacagagaagcgctcct
ctgagtctggaggaggcgcggtgcccggtgtgctccgagatcctgctggagccggtgacg
atgccctgtggacactcggtgtgcctgcactgcttccagcgcacggtgaagctgaccagc
ctgtgctgtccgctgtgccggctgcgggtgtccagctgggcccggaaacagtcccgggag
aagagcctggtgaacgccgagctctgggagctgatccgcctcagccacccggagagatgc
aagcggaggatggagcagagggacggacagaccgccgacggagaaatttttcgtgcacct
gtaccaattcataaatctggagaaatgcgtcaagagtacgagaaacaaaagatgaagggt
ggaagcagtgaagaaaccgaagagaggaagaaaaaaatccacagaaaagaagagtgtggg
atgctgaaactttgtcaataccccttctgtggggtgtcagactcggagaatgaaaagccg
gtgggaaagaggaccagacatgtctcggcatttgtgcgaaaaacaagatgctcccctgct
ttcagtagaggttgtcttcatagcagtgctgttcagaggagcaggagctgtacagattct
gaggatggaagaggaaaaaccagaggtcacacacatcacgtcgttcctgacaaggctatc
atcactcatagttacaacgctggaatccttctttcctcggaaaacagtcgctctttctca
gccccggtgctgagcctagataagagacaccactggcggggcatccacacctcatccgct
tcactcatacttcaaacaaaaccagagaggtccattagccccgagagcaacgatagcata
tcggaagaactcaaccatttcaagcctattgtctgttcgccgtgcactccacccaaaagg
ctgcccgatgggcgacttttggagcctactatcgtgaagtcaaccccaaggaacttgaca
cgctctctgcacaagtccacaagctacgaggccagtccgactatcttgcagaagtggaag
cagattgaagttgatcgtcactgcatcaaggtgacctcaaaaggtacagtcacgagtccg
atcgcagaggatctaagccttaaactgagttccgttgaagaacaggacagccaaatctgc
agctgtgctgtagccaaggacagctcgcaagaccatcagtgcatttgtgattcaagtgct
aaggatcggaaggataaacctgtagtctgtaataaacgacggcttgtatttgatcagtgt
acccaagaggaagctagcgctcacatcagttcggcaactcaaatcatttcagatgcttca
tccgcaaaaaggcgtagcaggtgtgaanncaactctgtaagtggacactgtaatcagggt
acgaaagacccggagaacttcgtaaatgagcctaccaccaggagctgtgtacataacaga
cctacctcaagaaggggcaagaagagaagccacaaaaccaaacatttggaagacacccta
cagacaaaaatgtcccggaaaggtgcctatgacaggcttgatcatatgattgtccagcga
attaatcgggaaaaggaggaccgagaactggcactaaagctacaaagacagtttgacaga
gaatgccaaaaagtggacaggcacaaaacgagtcgtaacaaatacgaactccggtcctgg
gctacaaatgatgggatggtaggacacaatacacgcagatcaggaagaatctccaaacga
aatgagcactttaactacagctgttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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