KEGG T05134: 109085355

Cyprinus carpio (common carp): 109085355

Entry

109085355         CDS       T05134

Name

(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer-like

K11592

endoribonuclease Dicer [EC:3.1.26.-]

Organism

ccar Cyprinus carpio (common carp)

Brite

KEGG Orthology (KO) [BR:ccar00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109085355
Chromosome and associated proteins [BR:ccar03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    109085355
   microRNA pathway
    RISC loading complex
     109085355

SSDB

Motif

Pfam:

Dicer_platform Dicer_dsRBD Dicer_PBD Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ DEAD Helicase_C ResIII dsrm SLFN-g3_helicase

Other DBs

NCBI-GeneID:

109085355

NCBI-ProteinID:

XP_018955460

Position

Unknown

AA seq 1751 aa
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLIKELSHQIRGEDGKRTVFLVNAASSVVQQASTVRTHSELQVGDYMSEDMTSWP
EEMWSREMMENQVLVMTCHIFLHVLKNGVLPLSKINLLVFDECHLAITDHPYQEIMKICE
GCPGCPRIFGLTASILNGKCDPCDLEEKIQNLEKILQSNAETATDLVVLDRYVCVPASXG
SQPREVVLDCGLYQDQSGLSERLLNELDEALNFLNDCNLSAHREDRDPTFISKQVLNDCR
AVLTVLGPWCADKAAGIMVRELQKYIKHEQEELNCKFLLFTDTILRKIHALCEEHFSPAS
LDLKFVTPKVIKLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEAEAK
EKPEANFPSPFTNILCGIVFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKN
QPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYV
QSKGRARAPVSNYIMLADSERTKPFEEDLKTYKAIEKILRNKCSKSTECSDFELEPVTDD
DNVLPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYQSTL
FLPINSPLRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELD
LHDEEETNVPGRPGSTKRRQCLPKSIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNF
RRRKLKLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLSAEQLEL
ITRLHQYIFSHILRLEKPALEFKPIEADSAYCILPLNIVEDSNTLDLDFKFMEDIEKSEA
RIGIPNTQYTKQNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEY
ETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWE
SLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTL
PPDFRYPNLDFGWKKSIDSKSFISCPSACMEDDDHCKHGTSSDSDHTAQEGCSTEASQPP
EGALPCENCDTPDKMLETHMLPVTDLQTPNKDKSDCVFSCNLLNGTRSNSDNLPHRPDIC
QCSQLGPLESDLSTQTTTSVPVRPSPAGEPQPQPSDECTPGRNSNLCDRHVKKPTSNCFP
KPEMATSTTAPSEVSSEVSDVTSTSTCTGPAWDSPKTLGPNPGLILQALTLSNASDGFNL
ERLEMLGDSFLKHGITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS
IFDPPVNWLPPGYVVNQDKSSTDKWDSDEDMCTEPSKKNGKNSASGFYQTSPWFQRRLAC
YGLFLCSLGLKVLPAEKQSSGGSAELQYGCLKIPPRCMFDHPDAERTLNHLISGFENFEK
KINYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV
LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR
SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPR
SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS
LKANQPQVQNN

NT seq 5256 nt +upstreamnt +downstreamnt
atggctggcctacagctggtgacccctgcctcctcacccatggggcccttcttcggtctt
ccgtggcaacaggaagctatccatgacaacatatacacaccaaggaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactattgtctgcttaaatactggctcagggaag
acctttatcgcagtactcctaatcaaagaactctcccaccaaatccgtggagaggatggg
aagagaacagttttcctggtgaatgcagcatcatctgtggttcagcaagcatctactgta
agaacccactctgagctccaggtgggcgactacatgtcagaggacatgacatcatggccc
gaggagatgtggagcagagagatgatggagaatcaggtgctggtcatgacgtgccacatc
ttcctccatgtgttaaaaaatggagtcttgccactatcaaaaatcaacctgctggttttt
gacgaatgccaccttgcaatcacagaccatccttatcaggaaataatgaagatttgtgag
ggttgtccaggctgtcctcgcatttttggtctgactgcttccattttaaatggcaaatgt
gacccttgtgatctggaggagaagattcagaacctggagaagattttgcagagcaatgca
gaaactgccactgatcttgtggtgctggataggtatgtatgcgtcccagcctcgtgaggt
tcccagcctcgtgaggtagtgcttgactgtggactgtaccaggatcagagtgggctctct
gagaggcttttaaatgagctcgatgaagcccttaattttcttaatgactgcaacttatct
gctcatagagaagacagagatcccacattcatctccaaacaggtgctgaatgactgccgc
gccgtgttgactgtgctgggcccttggtgcgccgataaagctgcgggaatcatggtccgg
gagctgcagaaatatatcaaacatgaacaggaagagctgaactgcaagttcctgttgttc
acagacaccattctgagaaaaatccacgccttatgtgaggagcatttctccccagcttcc
ctagacctgaagtttgtcactcccaaggtcatcaaacttctggagattctccacgagtac
aagcctttcgaacggcagcagtttgagagtgtggagtggtacaataatcgcaatcaggac
aattatgtttcttggagcgattccgaggacgaagatgaggatgaagaggcagaggcaaag
gaaaagcccgaagctaattttccgtcgccttttaccaacatcctctgtggtatcgtcttt
gtggaaagacgatatacggcagttgttttaaacagacttatcaaggaggcagggaagcag
gacccagagctggcctacatcagtagtaacttcatcacaggtcacagcattggcaagaac
cagcctcgcaacaaacaaatggaggtggagttcagaaaacaagaggaggtcctgaggaag
ttcagagcccatgaaaccaacttgctcattgcaaccagcattgtggaagaaggcgttgat
attccaaagtgcaatttggtcgttcggtttgacctgccgacagagtaccggtcgtacgtg
caatccaaaggtcgcgcccgggctccagtctccaattacatcatgctagctgacagcgaa
cggacaaaaccatttgaggaagacctcaagacctacaaggccatagagaagatcctccga
aataagtgctcgaagtcaacagaatgcagtgattttgaactggagccagtgaccgatgat
gacaatgttttaccaccttacgtcctgcgctcagaggacggcggcccccgtgtcacgatt
aacacagccatcggacacatcaacagatattgtgctcgcttgcccagtgatccgttcact
catcttgctccaaagtgtaaaactgtggagcttaagactggaggttatcagtccacactc
ttcctacccattaactcaccactcagagttcctgtcaccgggccaacaatgaactgtgca
agacttgctgagaaagctgttgctcttctctgttgtgaaaagctgcacaaaattggtgaa
ctggatgatcatttgatgccagtgggaaaggaaactgtgaagtatgaggaggagctggac
ctgcatgatgaggaggagacgaacgtgccaggaagaccaggctccaccaaacggagacag
tgtttacccaaaagcataccagagtgtctgcggggttgttaccctgtgccagaacagcct
tgctacctttacgtcatagggatggtccttaccacacctcttcctgatgagctcaacttc
cggcggaggaagctgaagctgtacccaccagaggacactacccgatgttttggcattctg
acagctaaaccaatacctcggatccctcacttccctgtgtatacacgttctggtgaggtg
accatttcgattgagctgcagaagtcgggtttcactctgagcgcggagcagctggagctg
atcacgcgtttgcaccagtacatcttctcccacatcctccgtcttgaaaagccagcacta
gagtttaagcccatagaggcagattctgcctactgcattctacctctcaacattgttgag
gattccaatacgttggacctggatttcaagttcatggaggatattgagaagtctgaagca
cgcattggcattccaaatactcagtacaccaagcaaaacccattcattttcaaattggag
gactaccaggatgctgtcatcattccgaggtatcgtaattttgaccagccacatcggttc
tatgtggctgacgtttacacagacctcaccccactcagtaaattcccctctccagagtac
gagactttcgctgagtactacaaaaccaagtacaacctggacctgtctaatgttaaccag
cctctactggatgtggaccacacatcttcaagattgaatcttttaactccccggcatctt
aatcaaaaggggaaagcccttcctctcagtagtgcggagaagagaaaggccaagtgggaa
agcctacaaaacaaacagattttagttccggagctctgtgccattcaccccatcccagcc
tctttatggaggaaagccgtctgccttcccagcattctctacagacttcactgccttctg
acggccgaagagctgcggtctcagacagccattgacgctggtgtaggcgctcagaccctg
cctcctgatttcaggtatccaaatttggatttcggatggaagaaatccatcgacagcaag
tctttcatttcctgccccagtgcgtgtatggaagacgacgatcactgtaaacacggcaca
agctcagattcagaccacactgcccaggagggctgcagtacggaggcctcccagcctcca
gagggcgcgctcccctgtgagaactgcgacacaccagataaaatgctagaaactcacatg
ctccctgtgactgatctccagacgccgaacaaagacaagagtgactgcgtcttttcctgt
aacctccttaacggcactcggagcaatagcgacaaccttccacatagacctgacatttgc
caatgctctcagctgggccctctggagagtgacctatcaacacaaaccactacctcagtt
cctgtgaggccctctccagccggcgagccacagccccagcccagcgatgaatgtacccca
ggcagaaactcaaatctctgtgacagacatgtgaaaaaacctacctcaaactgtttcccc
aaaccagagatggcaactagcaccacagcaccttcagaagtgtcatcagaagtctctgac
gtgacatctacatcaacctgcacaggtccagcctgggattctccgaaaaccttgggcccc
aaccccggcctcatcttgcaggccctgaccctctccaacgccagtgatggcttcaatctg
gagagactggagatgttgggtgactctttcctgaaacacggcatcaccacctacctgttc
tgcacttaccctgacgcccacgagggcagactgtcatacatgagaagcaagaaggtcagc
aactgtaacctttatcgcctgggaaagaaaaagggccttcccagtcgaatggtggtatcc
atatttgatcccccggtaaactggcttcccccgggctacgttgtgaatcaggacaaaagc
agcacagacaagtgggactcggatgaggacatgtgcacagaaccaagtaagaaaaatgga
aagaactctgcttctggtttctaccagacctctccatggtttcaacggagactggcttgt
tatggcttgttcctgtgctccctcggcctgaaggtgctgccagcggagaagcagagttca
ggggggtctgccgagctgcagtacggctgcctgaagatccctccacgctgcatgtttgac
cacccggatgctgagcggaccctcaaccacctcatctctggcttcgagaacttcgagaag
aagataaactacacgtttcaaaacaaggcatatcttctgcaggctttcactcacgcctcg
tatcattacaacaccatcacagattgttatcagcggttggagttccttggtgatgcaatt
ttagactacctcataacaaagcacctttatgaagatccccggcagcactccccaggcgtg
ctgactgacctgcgctctgcacttgtcaacaacaccatatttgcttccctggctgtcaag
tacgattaccacaagtacttcaaagctgtctcgcccgaactgttccacgtgatcgatgat
tttgtgcaatttcagctagagaagaatgaaatgcaaggaatggattcggagcttcgccga
tcagaggaagatgaggagaaggaggaagacattgaggtccccaaagcaatgggagacatc
tttgaatcactagctggtgcaatttacatggatagcaggatgtcacttgagacagtttgg
caagtgtattatccaatgatgaggccactcatagaaaaattctctgctaatgtccctcga
tccccagtgcgagaactcttggagatggaaccagagacagctaagttcagccctgcggag
agaacctacgatggaaaagtacgggtgacggtggaagtggtgggcaaaggcaagttcaaa
ggcgtgggacgcagctaccggatagccaagtcagcggccgcccgccgagccctgcgcagt
ctcaaagccaatcaacctcaggtccaaaataactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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