KEGG   Cyprinus carpio (common carp): 109095323
Entry
109095323         CDS       T05134                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04145  Phagosome
ccar04514  Cell adhesion molecules
ccar04672  Intestinal immune network for IgA production
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109095323
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109095323
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109095323
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109095323
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109095323
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109095323
  Exosomal proteins of epithelial cells
   109095323
  Exosomal proteins of breast milk
   109095323
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Fe_bilin_red
Other DBs
NCBI-GeneID: 109095323
NCBI-ProteinID: XP_018964572
Position
16:complement(10460364..10464286)
AA seq 305 aa
MQYDMSVLHRGWDYHMQACCVSVHRHIYSQVTHISIANCKMKYNHVVHLAMFLSALFEKV
SAHGYFGYVQTQCRVPGSIEKTEFIFSVTYNKIEYIRYNSTEDKAVGYTEFGEKWAEDYN
KNKILLAQAEFGLDKCKGIAKFIVPNAGLTVKPEVIIRSAREAKGNEKAVLVCSAYDFYP
KLIKLTWLRDDKEVTADMTSIEELADGDWYYQVHSHLEYFPKPGEKVSCVVEHASSHKPM
IYDWDSSPSESERSKIILGAVGLLMGVFMAAGGLIYYKRKHTGFYRLPVCLLPIQPMNDT
ELQLQ
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcaatatgatatgtcagtgttacatcgtgggtgggattaccatatgcaggcatgctgt
gtttctgtacacaggcatatttattcacaagtcacacatatcagcatagcaaattgcaaa
atgaagtacaatcatgtggtacatctcgcaatgtttttgtctgctctttttgaaaaagtt
tcagcacatggatattttggatatgttcaaactcagtgtcgagtaccaggctccatagaa
aaaactgagtttatcttctcagtcacctacaacaagattgaatatattagatataacagt
actgaggataaggctgttggttacactgaatttggagagaaatgggctgaagactacaat
aaaaacaagattttactagcacaggcagaatttggccttgacaagtgcaaaggaattgca
aagttcattgtccctaatgcagggctgacagttaaaccagaagtcattatccggtcagcc
agggaagctaaagggaatgagaaagctgttctggtgtgcagtgcctatgacttctatccc
aaactcatcaaactgacgtggttgagagatgataaagaggtgacagctgatatgacgtcc
attgaggagctggctgatggtgactggtactaccaggtccactcccacctggaatacttc
cctaaacctggagagaaagtctcctgtgtggtggagcacgccagctcccataaacccatg
atctatgactgggattcttctccgtctgagtctgaaaggtctaagatcattcttggggct
gtggggctgctgatgggggtttttatggcagctggaggactgatctactataaaagaaaa
catacaggcttttacagacttccagtctgcttacttccaattcaaccaatgaacgacact
gaactgcaactccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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