KEGG   Cyprinus carpio (common carp): 109097464
Entry
109097464         CDS       T05134                                 
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109097464
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ccar04990]
    109097464
Domain-containing proteins not elsewhere classified [BR:ccar04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   109097464
SSDB
Motif
Pfam: LIM PDZ DUF4749 PDZ_6 PDZ_2 zf-C3HC4_3
Other DBs
NCBI-GeneID: 109097464
NCBI-ProteinID: XP_018966653
Position
19:complement(5744499..6090162)
AA seq 590 aa
MSNYSVSLTGPSPWGFRLQGGKDFSMPLTISKLTEGGKAVKAKISVGDVVLSIDGIATDG
MTHLEAQNKIKACTGNLNLSLLRSSSITKTETSKEEPQEIIKPVPISQAPGASTGPASVA
YNKTARPFGGTTNTVRSVSPKASIPSASSAFTPAAPSQQPGSAPKPTSGHSPFANSSSTP
SSGSSSPARMMAPPPAPVAPHSSVYNTPINLYSNENVCEVALGQRRGLLESKATGEQHNG
KTPPRTARKPVLDPEGNHVSALGDASKKRVIEDTEDWHPRTGTSQSRSFRILAQITGTEN
EQAQENRPGKNEAAEELQPSSHATSSVKTVSKASSGAPQQGNGVPPAAAKSHQSSSAAGF
PKAGAPVPQTGPSIGRVSSKGPDRPTPQAHPSDGDDSLVQRAEHIPAGTRTPMCGHCNMV
IRGPFLVAMGKSWHKEEFNCSHCRSSLADVGFVEERGSVYCERCYEQFLAPACFKCQQKI
LGEVINALKQTWHVHCFLCTGCQQPIRNNTFHLEDGQPYCETDYYTLFGTSCHGCDFPIE
AGDKFLEALGFTWHDTCFVCTVCSTSLEGQTFFSKKDKPLCKKHAHTVQF
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgagtaactacagcgtgtccttgaccggaccttcaccctggggcttcagactacagggt
ggcaaggacttcagcatgcctctcaccatctccaaactgacagaaggaggaaaggcagtg
aaagccaagatcagcgtcggggatgttgtgctgtctatcgatggcatcgccacagacgga
atgacacacctggaagcccagaataaaatcaaagcctgtacaggaaacctgaacctctcg
ctgctgagatcttccagtatcactaaaacagagacttcgaaggaggaaccgcaggagatc
ataaagccggtgcccatcagccaagcgcccggggcctccaccggccccgccagcgttgct
tataataagacggctcggcccttcggcggaacgactaacaccgtcagatcagtcagtccc
aaagcctctatcccctccgcctcgtctgccttcaccccagccgctccgtcccagcagcct
ggctccgcccccaaacccacctctggtcactcccccttcgctaactcctcctccacaccc
tcctctggctcctcctccccggcgagaatgatggctccgcccccggcccccgtcgcccct
cattcgtccgtctataacacgcccatcaacctctactccaatgagaatgtgtgtgaggtg
gccttgggccagaggcgtggcctgctggagagcaaagccactggggaacagcacaacgga
aagactcctcccagaaccgctcgtaagcccgtgctggatccggaggggaatcacgtctca
gctctcggtgatgccagtaagaagcgtgtgatcgaggacacggaggactggcacccgcgc
accggcacgtctcagtcgcgctccttccgcatcctggcgcagatcaccggcacagagaac
gagcaagctcaggagaaccggccggggaagaacgaggcggcagaggagcttcagcccagt
tctcatgccacgtcttcagtcaaaaccgtgagcaaagcgtcctctggagccccgcagcag
ggcaacggcgtccctccagccgcagccaagagccatcagtcgagcagcgccgcagggttt
cccaaagcaggtgcacctgtgccgcagacgggcccctcgatcggacgggtcagcagcaag
ggcccggatcgacccacacctcaggctcaccccagcgacggggacgattcgctggtgcag
agagccgagcacatcccggcgggaacacgcacacccatgtgtggacactgcaacatggtc
atcaggggtccattcctggtggcgatgggcaaatcctggcataaggaggagttcaactgc
tctcactgccgcagttctctggcagatgtgggttttgtggaggagcgtggctctgtctac
tgcgagcgctgttatgagcagtttctggccccggcctgcttcaaatgccagcagaagatt
ctgggggaagtcatcaacgccctgaagcaaacctggcatgtgcactgcttcctgtgcacc
ggctgccagcagcccatccgcaacaacaccttccacctggaggacggacagccgtactgt
gagaccgattactacaccctgttcggcaccagctgtcacgggtgtgacttccccatcgaa
gcaggcgataagttcctggaggcgctggggttcacctggcacgacacctgcttcgtctgt
acggtttgcagcacaagtctggagggtcagaccttcttctccaagaaagacaagcccttg
tgcaagaagcacgctcacaccgtccagttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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