KEGG   Cyprinus carpio (common carp): 109099835
Entry
109099835         CDS       T05134                                 
Symbol
chd8
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8
  KO
K04494  chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109099835 (chd8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109099835 (chd8)
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    109099835 (chd8)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo BRK HDA2-3 DEAD ResIII
Other DBs
NCBI-GeneID: 109099835
NCBI-ProteinID: XP_018968873
Position
3:7808815..7831386
AA seq 2500 aa
MADPIMDLFDDTPLFNLDSLPEDAFSSDPVEEALKLALGQVDPPTDPTADPGVSVLNDVT
DPALISTPVAAPASIPLQTIQTQQSTQMSHEVSVAPSSLSIQPSLSVASNSSGAATVLLS
SSLGVPVSGAQVTTQQLQTQQIAVTQQATGQSAPKIVIFKGPQGQTQVLQGVTGATGSPG
KVTLARVLTGTPLRPGMAVVSGGTVLNATSPGQGQVKVGTGVQRLVQTPNGPMKQVLLTS
VPQTQSQVHTQPVQVQINNXSLKKNYIDLKKNINDKHTTILLKLELQLKQNMKIKNSLKI
LIKTNDISLMIKXKLSLRCFYQFVIIFIVRILIALKFSIQGEPKRITLVLQQPSQGGGQA
GTVTVGGTAAAGVGQQGQQHRLVLGSLPGKLVLQGGQLAALAQAKMGQTGAQPKVLTIQL
QVQQQPNQQGAKFQLVSGAGNAGGSPQVVQISQGQGGQRLAVPLKLLLQPQSHTASSAGG
AVSVVKVINTLATGSASGTTTTAASSGVRLAKVQEPVRKVETLCKQEKANRIVAEAIARA
KARGERNIPRVLNQDELPAGQTSADLEDAAGAGGAKKKGGGGGGSGGSKKKSPSAGVGKL
VVGGDKKSKAKTPGVVSGGGGSKSKSKTKLNTITLVGGKKRKRNASSDHSDIDLSPPVSP
RTLEEEMSQKRRSNRQVKRKKYTEDLDIKITDDEDEMDADIDVTTAPVSGAGYLQSMGAE
LRQELDGDGLPSMQFFVENPSEEDAAIVDKILSMRVTKKEVSPGQYTNVEEFFVKYKNYS
YMHCEWASLEQLERDKRIHQKLKRFKTKQAQMRNIFQEDEEPFNPDYVEVDRILDESHSV
DKDNGEPVVYYLVKWCSLPYEDATWELKEDVDEAKVEEFRKIESRPARLKRTPRPAASAW
KKLDESREYKNGNQLREYQLEGVNWLLFNWYNSFEGHLIPGAYKFDALITTFEMILSDCP
ELREISWRCVVIDEAHRLKNRNCKLLDSLKMLDHEHKVLLTGTPLQNTVEELFSLLHFLE
PAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTD
VQKKYYRAILERNFSFLSMGATHNSNVPNLLDTMMELRKFYWSVPFYVGSYCAEEKIVAE
LREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIH
KRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDW
NPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDS
SVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGS
TFSKASFVASENRTDIALDDPEFWQKWAKKADIDMDSFNRKNTLVIDTPRIRKQTRQYSS
LRGEGGDLSDLDSDDDYPPHNSRQSRASRRSDRHSGGGYGRTDCFRVEKHLLVYGWGRWR
DILSHARCKRRLSERDVETICRVILVFCLIHYRGDENIKSFIWELITPPENGREPQALLN
HSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRV
RMLYYLKQEVIGEHADSVLRGADARDIDIWLPEMEQQDVPSGWWDAEADRCLLIGVYKHG
YEMYTTMRADPCLCFVERCGRPNEQDINAEQQAADPELGEGGDYDKYSEDPEFKPATRHT
KEVYEEADSVNVDGEICVEDRSAPVQVEGPSSVSSDLCYWPTSSSLTARLRRLITAYQRS
YRREQLKMEAAEKGDRRRRRCEQATKLKEIARQERQQRWTRREECDFYRVVSTFGVERIK
KEADASEGDEHHMDWNRFRSFARLDKKTDESLTRYFKCFMSMCRKVCHLRPARGDESQDL
SQSLAPITVERASRTLYRVGLLCRLREHVLPHPSLEERLSLAPPSSDLPSWWSIPQHDHE
LLLGAARHGISRTELSIFPDSQYSFSQTRQDYLQNQQAQAASQIHALSQSQDPTTIKEES
LDDESRLLGVEALCPSDSPAMLLSHSEGKVGVQAAWGWKSKNNVPSERKGGRDGGEGPSD
SDSDSDSGSSSSSRHSGSSDDSGDSDAEREQAALKMCDGDEENSILSFTPSQEGAPPESL
TDPLRVDWPKDRVLINRISNLCSLVLTGHWPSGRRYVSDIQLNATSEEHDIGDGLGYPRV
ARKSNSALSTEALEGQESEFTVKLLKEEGLKLTFSKQALMPNGEGSARKKRKDHELVDAE
GLNCLLGVLLGRTQLKMFLSLLQLLVNRTKRKRRRKRVEKGAALTGSERVKVIDIRTGKK
FSGIYGPLLQDLREHLEENPDHVVAPEWSETVRNSGFLPESLFHRLLSPHASVPKKNRHY
LSTPSIQTEDPLLGGGEGETLVSDGAYMMDDEDLEDGSHLTSSHHFLTPAYDVKIEPSAL
DMDGGDSLSQGGYDSSDREAILDDVIMAPKNSDSSSSSED
NT seq 7503 nt   +upstreamnt  +downstreamnt
atggcagaccccattatggacctctttgatgacacacctctgttcaacttggattcccta
ccggaggatgcgttctcctcagacccagtcgaggaggcgctgaagttggcactgggccaa
gtggacccacctacggaccctacagcagatcctggtgtctctgtgctcaatgatgtcaca
gatccagctctaatctcaacacctgttgcagctcctgcctccatcccactgcagaccatt
caaacacagcagtccacccagatgtctcatgaggtttctgttgccccatcttcactttct
atacagccttctctctcggtggccagtaatagcagtggggcggcaacggtcctgctgagc
tcctctcttggagtacctgtgtcaggggctcaagtcaccacccagcagctgcagactcag
caaatcgctgttacccaacaggcgacagggcagtcggccccaaaaattgtaattttcaaa
ggccctcagggtcagactcaagtgctacagggtgtcacaggagccacaggctctccaggg
aaagtcacccttgctagagttctgacagggaccccgctcaggccagggatggcggttgtt
tctgggggaacagtattaaacgcaacatctcctgggcagggacaggtcaaagtgggcact
ggagtccaaaggctggttcagactccaaatggcccgatgaagcaggtgttactgacctct
gtgccccagactcaatcgcaggttcacactcagccagtccaggtgcagataaataactaa
agcttaaagaaaaattatatagacttaaaaaagaatataaatgacaaacacacaacaata
ttactaaaacttgaactacaattaaaacaaaatatgaaaataaaaaactcattaaaaata
ttaataaaaactaatgatatatcgctgatgataaaataaaagttgtctctacgctgtttt
taccaatttgtaattatttttattgttagaatcttaatagcccttaaattctctattcag
ggggaaccgaagaggatcacactggtgctacagcagccctcgcaaggtggaggccaggct
gggacagtgacagtagggggaactgcagctgcaggggtgggtcagcagggccagcagcac
aggctggtgttgggctctctgccagggaagttggtcctgcaggggggccagctggcagct
ctcgcccaagccaagatgggtcaaacgggtgcacagccgaaagtgctcaccattcagctg
caagttcaacagcagcccaaccaacagggagccaagtttcagttggtttctggggcaggt
aatgctggtggcagccctcaggtggtgcagatttctcaaggccaaggaggacaaagacta
gcagtgcctcttaaactacttctgcagccacagtcacacactgcttccagtgctggtggg
gccgtttctgtggttaaagttatcaataccttggctaccggctctgcgtccggcaccaca
actacagctgcgtcttccggtgtgcgtttggcaaaggtccaggagcctgtgcgaaaagtg
gagaccctgtgcaaacaggagaaagcaaatcgcattgttgctgaggccatcgcacgggcc
aaagccaggggtgaaaggaacatcccccgtgtgctcaaccaggatgaactgccagctgga
cagacctctgcagatctagaggatgctgcaggggctggaggagccaaaaagaaaggaggt
ggtggtggtggtagtggagggagcaagaagaaaagcccaagtgcaggagtaggaaaactg
gtggtaggaggagacaagaaatccaaggcaaagactccaggagtggtttctggaggtgga
ggcagtaaaagtaaatccaagactaagctcaacaccatcactctagtgggtggtaagaaa
aggaaaagaaatgcgtcctctgatcattcagatatagatcttagcccacctgtttcaccc
cgcacactggaggaggaaatgtcacagaagcgacgttctaaccgtcaagtgaagaggaag
aagtacacagaggatttggacattaaaatcacagacgatgaagatgaaatggacgcggac
attgatgtaaccacagctcctgtgtctggtgcagggtatctccagtccatgggagcagaa
ctccggcaggaactggatggggatggtcttccaagcatgcagttttttgtggagaaccca
agtgaggaggacgctgctattgtggataaaatattgtctatgcgggtgaccaaaaaggag
gtgtctccagggcagtatactaatgtggaggaattttttgtgaaatataaaaactattca
tacatgcactgtgaatgggccagccttgagcagttggaaagagacaagaggatccatcag
aagctaaagagattcaagacaaaacaggcacagatgaggaacatatttcaggaggatgag
gaacctttcaatccagactatgtggaggttgatcgtattttggatgagtcacatagtgtc
gataaagacaatggggagccggttgtgtactacctagtgaagtggtgctctctgccctat
gaagatgctacttgggagctgaaggaggatgttgatgaagcaaaagtggaagaattcagg
aagattgaaagccgcccggcccgactcaagagaactcctcgacctgctgcaagtgcctgg
aagaagcttgatgagtccagagagtataagaatgggaaccagctccgagagtaccaactg
gagggagtcaactggctgctcttcaactggtacaacagctttgagggacacttaatacca
ggggcctataagtttgatgctctgatcacaacttttgagatgattctatcagattgccca
gagctgagggagatttcttggcgctgtgtagttattgatgaagctcaccgtttgaagaac
agaaactgcaaactcctggacagcctcaagatgcttgaccatgagcataaagtgttgttg
acaggcactccacttcaaaacacagtagaagagctgttcagtctgctgcactttctggaa
ccagcccagttcccctcagagatagagtttttgcgcgagtttggcgatcttaaaacagag
gagcaggtccagaaactgcagtcaatcctaaagcccatgatgctgcgtagactgaaagaa
gatgtagaaaagaaccttgccccaaaacaagagaccattattgaggtggagttgactgat
gtacagaagaagtattaccgtgctattctagaacgtaacttcagcttccttagcatggga
gccacgcataacagcaatgtacccaatctcctcgacacaatgatggaacttcgaaagttt
tattggtctgttcccttttacgttggctcttattgtgctgaagagaagatagtggctgag
ctgagggaggtgtatgatcctctggctccagactttcatctccaggctctggtgcgctct
gcagggaaactggtcttgctggataagctgcttcctcgccttaaggctggcgggcacaag
gtgctcatcttctcacagatggtgcggtgcctcgacatccttgaagactacctcatacat
aagagatatctgtatgagcgcattgacggccgggtcagaggaaatctgcgacaagcggcc
attgatcgctttagtaaacctgattcagatcggtttgtcttcctgctttgtacccgggct
ggaggtttgggcattaatctgactgctgctgacacctgtgtcattttcgactcggactgg
aacccacagaatgatcttcaagctcaggcacgttgtcatcgtatcggtcagtctaaagcg
gtgaaggtgtatcgtctcataaccagaaactcctatgagagggagatgttggacaaagcg
agtcttaaactgggacttgatcgagctgttctacaaagcatgagtggaaataaagacagc
agtgttaacgggatccagcagttctcaaagaaggagatagaggatttgctccgtaaaggt
gcttatgcagccattatggatgagaatgatgagggcagccgtttctgtgaggaggacatc
gatcagatacttcagagaagagcaactactatcactatagagagtgaaggtaaaggatcc
accttctccaaggccagttttgtggcgtctgagaaccgcacagatattgctctagatgat
cctgagttttggcagaagtgggccaagaaagccgatatagacatggactctttcaacagg
aagaatactcttgtgattgacacaccaagaataagaaaacaaacgcgtcagtattccagc
ctgcgtggagagggtggtgatctgtctgacttggacagcgatgatgactacccaccccat
aattcccgacaatctcgggcctcccgacgctcagaccggcattctggtggtggttatggg
cgcacagactgcttcagagtggaaaaacacttacttgtttatgggtggggccgctggcgg
gatatcctgtctcatgctcgctgtaagaggcgtctcagtgaacgtgatgtggaaaccatc
tgccgtgtcatccttgttttctgtctgatacattaccgtggagatgagaacatcaagagc
ttcatctgggagctaatcacccctccagagaatggacgagaaccacaggctctgcttaat
cactctggtctgtccatccctgtccctcgtggcaggaaggggaaacgagtgaaggctcag
agctcttttgatgtgcagaaagttgagtggatccgaaaatataatcctgacagtcttctg
cttgatgacagttaccgaaaacacctaaaacaccagtgcaacaaagtgttgctgagagta
cgtatgctgtattacctgaaacaggaggtcattggagaacatgcagattctgtattgaga
ggagctgatgcaagggatattgatatctggttgcctgaaatggagcagcaggacgttccg
tctggctggtgggacgcagaagctgaccgatgcttgcttattggtgtctataagcatgga
tatgagatgtataccactatgcgtgctgacccctgcttatgttttgttgagcgatgtggc
cgtccaaatgagcaggacattaacgcggagcagcaagcagcagacccagagcttggggag
ggaggagactatgacaagtactcagaagatccagaattcaaacctgcgacaagacacacc
aaggaggtatatgaagaggctgattcggtgaatgtagacggcgagatttgtgtggaagat
cgctctgcccctgtgcaggttgaggggccatcttcggtatcgtcagatttgtgttactgg
ccaacaagctcgtcgctcacagccagacttcgccgtcttatcacagcctaccaacgcagt
tacagacgagagcagcttaagatggaggcagcagagaagggcgaccgtagacgtagacgc
tgtgaacaagccacaaagctcaaagagatagcccgacaagaacgacaacaaaggtggact
cgtagggaggagtgcgatttttacagggtggtttcaacttttggggtcgaaagaataaag
aaagaggctgatgcttcagaaggggacgagcatcatatggactggaatcgcttccgttct
tttgctcgacttgataagaaaaccgatgagagcttgacacgttacttcaagtgcttcatg
tccatgtgtcggaaagtgtgtcaccttcggccagcacgtggagatgaatctcaagatttg
tcccaatctctggcccccatcacagtagaacgagcctcgcgtacactctacagggtcggc
ttgctgtgccggctacgtgagcacgttcttccccacccctcgttggaggaacgcctcagc
ctggcaccaccctcctctgacctgcccagctggtggagcatcccacagcatgaccacgag
ctgctcttaggcgccgctagacatggcatcagccgcacagaactctcaatcttccctgac
tcacagtactcattcagtcagacccgccaagactacctccaaaaccagcaagcccaagcg
gcttcacagattcacgcgttaagtcaatcacaggatccaaccactatcaaggaggagagc
ctagatgatgagtctcggctgctgggggtggaggccctctgtccgtcagactctccagcc
atgcttctctcccattctgaggggaaagttggagttcaggctgcatggggctggaagagc
aaaaacaatgttccgagtgagagaaaaggaggaagagatggaggtgaaggaccgtcagat
tcagattctgattcagactctggctcatcttcctcctcacgtcattctggcagctcagat
gacagcggagacagtgatgctgagagagaacaagcagctcttaagatgtgtgatggcgat
gaagaaaacagcatcctctcattcacaccatctcaagaaggcgccccacccgagtccctc
actgaccctctgagagttgattggcccaaagaccgtgtgttgataaaccgaataagcaac
ctctgttcgctggttctaacggggcactggccgtcaggtcgacgctatgtctctgacata
cagctcaatgctacatctgaagagcatgacatcggagatggccttggttacccccgagtg
gcacgcaaaagcaacagtgccctgtctacagaagctcttgaaggccaagaatcagagttt
acagtaaaactcctaaaggaagaggggctgaagttgacattttctaagcaggctctcatg
ccaaatggtgaagggagtgcacgcaaaaagagaaaggaccacgagctggtagatgccgaa
gggttgaactgtcttctcggagttcttcttggacggacacagctaaaaatgttcctctct
ttgttgcagttactggtgaaccggaccaaaaggaagaggaggaggaagagggtagagaaa
ggagcagcacttaccggcagtgagagagtgaaagttatagacataagaacaggaaagaag
tttagtggaatatacgggcctttactacaggacctgagagagcacctggaggagaatcct
gaccatgttgtagcaccagaatggtctgagactgttcgtaactcgggcttcttgcctgag
agtttattccacagactgttgagtccccatgcttcagtccccaaaaagaatcgacattac
ctctccaccccttccatccagactgaagaccctctcctgggaggcggcgaaggcgagaca
ttagtttccgatggtgcatacatgatggacgacgaagatctggaggacggcagtcacctc
acgtcatctcaccacttccttactccagcctacgatgtgaagatagagccaagtgctctt
gatatggatggaggcgacagtttgtcccaaggtggctatgatagctccgacagagaggcc
attttggatgatgtcatcatggcaccgaagaattcagactcttcctcaagctccgaggat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system