KEGG   Cyprinus carpio (common carp): 109104681
Entry
109104681         CDS       T05134                                 
Name
(RefSeq) protein capicua homolog isoform X1
  KO
K20225  capicua transcriptional repressor
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccar03000]
    109104681
Transcription factors [BR:ccar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    109104681
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 109104681
NCBI-ProteinID: XP_018973507
UniProt: A0A9Q9VH42
Position
31:complement(5112161..5131050)
AA seq 1420 aa
MFSSESPQYLRQGLSMFVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHP
QAASLKKEAQSGSVLKEIIEGAPNPSSRPTPSADELPPEREKDAERERPDSETESDVDDP
FFPGVLPDPPISASPGKRRSQSLSALPKDDKTSPGKREKDHIRRPMNAFMIFSKRHRALV
HQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSS
SEGRGVPGGKDIRERSMSETTEPPSVSMGMELKGVGPGMVSVSERVGAEGQGQLPRPRAF
SQSAMHNLERSERGNPQALAELAQMCGDGGQVARRGALSQTQRGVSEDMTSDEERMVICE
EEGDDDVIDDSYPGSSIDLKCKERVTDSDSENGSGDEGERKRVFAPVICSSSYGHGRSVS
LSSYPSSRRFSDASSKRKRAVEGGDGERREGEGAVSQPSAGQSILVSSAGGVSSVLGAVR
VASTVVTNVVRPVVSTPVPIASKSPHDRKPAPPQTQLYIGPGTTGNPATASGGGGGYYSS
SSPNPVSASGAQGGLVTNLVLGGTFQAPPGVQLVTPPPPQNPASPASAPLTHSNGPLPLP
VLQSHILPSASITPSSGQKPITQVQYIIPTLSANNPKSPSPHQAGQPTNIFTLPTALPTH
ASLANGKQSGYVSSPAVGVVSPGARVQTQSPVLQGKMLVPMATVRAAPAASQQFPLVAPP
LPVQNGGQAGSKVRSQMIFQIAPMPVVQSQLPSTGPVQPGSPFSVTMGTATVVAPGSTPS
QTVLLPTPPTRITYVQSAPGVPSPLPLVPTTTVSSSQTASATPGSAYVPSPLATFAAIAH
PGQTLVQPLIAGQPSLLAPAQSPSAPHAPAISAIYTPTNVTLATGVVSMATVSPSVVYTV
SSSSCLSPHILPKHTIMTSMTSVTSDRQGNVSTHSERQLHQERTLDRQHTDSQVYTQSSE
RQTEKISLLQPDKQFQFPSKSSSSSVAPSPGTSVPLQPGSPAQTSHSGSAPGTPKLITPR
PPQKVKATVANIPVGSYDGGGRGKEREKERDREKEREREKDKESGSRFSFEVDKAAETSS
PAAFSPEEGSAEAESATPIGRGKEANAKEAEWKDSHPSSPLPPSSGSDPAPPQSHGDKDA
PPKKVKARPPPLKRPFDSVDKVLSEVYFEERFAKLPEFRPEEVLPSPTLQSLATSPRAIL
GSYRRKRKNSTDLDSSTEDPISPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFERPGNTS
PPTTPSSFCSLYYPDSTALSGTDGEDVLGELEFDKVPYSSLRRTLDQRRALVMQLFQEHG
FFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSELAGTSDISSLPGPSGA
AAASDLAAGAEPQEKEAEREGEQNSSEEPRNAGDSQDSTR
NT seq 4263 nt   +upstreamnt  +downstreamnt
atgttttcatcggaaagcccgcagtaccttcgccaaggactcagcatgtttgtgtggact
aatgttgagcccagatcggttccagtgtttccttggcattcattggtccctttcctggca
cccacccaatcagatccatcggctcaacctggtgagggccaacaaactgtcagtcatccg
caggcagcttctctgaagaaagaggctcagagtggatcagtgctgaaggagattatagag
ggagcacctaacccttcctcacggcccactccctccgctgatgaactgcccccagagaga
gagaaggatgcagagagagagaggcctgacagtgaaacagaaagtgacgtggatgatccg
tttttccccggtgttcttcctgatccgccaatttctgcgtctcctggaaagcgtagatct
cagtccctcagtgcactgcccaaagatgacaaaaccagtcctggaaagagggagaaagat
cacatccggaggcccatgaatgcgtttatgatcttcagcaagcggcatcgtgcgctggtt
catcagagacacccaaaccaggacaaccgcactgtcagcaagatacttggagagtggtgg
tatgctttgggacccaaagagaaacagaaataccatgacctcgcatttcaggtgaaggag
gcacactttaaggcacatcctgactggaaatggtgtaataaggacagaaagaaatccagc
agcgagggacgtggtgttccagggggcaaagacattcgtgagaggagcatgtcagaaacc
acagaacctccatctgtgtcaatgggaatggagctcaaaggtgtggggcctggcatggtg
agcgtgtcagagcgagtcggagctgagggacagggtcagttgccccgtcctcgtgccttc
tctcagagtgccatgcacaatctggagaggagcgagagaggcaatccacaggcactcgct
gagctcgcacagatgtgtggtgatggtggtcaggttgcaaggcggggtgctctctcccag
acacagaggggggtaagtgaggacatgacaagcgacgaagagcgtatggtcatctgtgaa
gaagagggggatgatgatgtcattgacgactcgtatccaggcagctccattgacctgaag
tgtaaggagagggtgacagacagtgatagtgaaaatggatctggagatgaaggagaacgc
aagagagtttttgctcctgtgatttgctcctcgtcttatggtcatggtcggagcgtatct
ctctcctcctaccccagctccagacgctttagcgatgcttcctcaaagagaaagcgagca
gtggagggaggtgatggagaaagaagggaaggtgaaggagcagtgtcccagccctctgcg
ggtcagtccatcctggtcagttctgctgggggagtgtcatcagtgctaggggcggtgaga
gtggcgtccactgttgtcactaatgtggtgcggcctgtggtcagcacgccggtgccgatc
gccagcaagtccccacatgaccggaaacccgctccgccacagacacagctttacattgga
cctggtaccacaggaaacccagcaacagcttcaggtggagggggtgggtactattcctca
tcatcacccaatcctgttagtgcatcaggagctcaaggggggctggtgaccaatctagtt
ttgggaggcacattccaagccccgcccggtgtacagcttgtcacaccccctcctccacaa
aacccagcctccccggcatcggcccctcttactcatagtaacggtccacttcctctgccc
gttctgcagtcacacattcttccctctgcctcaataacgccctcatcgggccaaaaaccc
ataacacaggttcagtacattatccctaccctctctgccaacaatcccaagagcccttcc
cctcaccaggccggtcagccaaccaatatcttcaccctacctacagctctgcccactcac
gcctcgttggccaacgggaagcagtcgggatacgtctccagtcctgctgtgggtgtagtt
agcccaggagccagagtgcaaacacagtcaccagtcttgcagggcaagatgctggttccc
atggcaacagtgagggctgctcctgccgcctctcagcagtttcccttggtagcccctcct
cttcctgttcagaatggaggacaagcaggaagcaaggtgagatctcaaatgatttttcag
attgcgccgatgcctgtcgtccagtcgcagcttccctctacaggaccagtgcagcctggg
agcccattttctgttactatgggaacagctactgtggtcgccccaggctctaccccgtct
cagaccgtgctgctaccgaccccacctacaagaatcacttatgtacagtccgctcctggg
gttccttctcctttgccattagttcccacgacaacagtctcatcctctcagacagcttca
gcaacacctggatctgcttatgttccatcacccttggcgacctttgcagcgatcgctcat
ccggggcagactttggtgcagccactgattgcaggtcagccatcactgttggccccggcc
cagtctcccagcgcccctcacgctcctgccatctccgctatctacacccctacaaatgtg
accctggcaactggggtggtgtctatggctacggtgtcacccagtgtggtgtacacagtg
tccagttcctcttgcctatctccacacatccttcctaaacacaccataatgacctccatg
acctctgtaacctcagacaggcaagggaacgtatccacacattctgagcgacagttgcac
caggaaagaacactggaccggcagcacacagacagtcaggtctacacgcaatcctctgag
agacagaccgagaagatctctctcttacagccggacaaacagttccagttcccaagtaaa
agcagcagcagttcagttgcaccctcaccgggcacctcagtgccactgcagcctggaagc
cctgctcaaacctctcattctggcagtgctccggggacaccgaaactgatcacgccaagg
cctcctcagaaagtgaaagccactgtggccaacatcccagtgggcagttatgatggagga
gggagaggcaaagagcgagaaaaggagagagacagggagaaagagagagagcgagagaag
gacaaagagagtggtagtcggttctcatttgaggtagacaaggcagccgagacgagctcc
cctgcagccttttcaccagaggaggggtccgcagaagcagagagtgctacacctattggc
cgtggcaaagaagcaaatgctaaggaggctgaatggaaggactcccacccttcttctcca
ttacctccttcctctggatcagatcctgctccgcctcagtctcatggtgataaagatgca
ccacctaaaaaagtcaaggctcggcccccaccactcaaacgaccgtttgattctgttgac
aaggtcctgtcagaagtgtactttgaggagcgctttgcaaagctgccagaattccgtcca
gaggaggttctgccttctccaaccctgcagagtctggccacctccccacgagccatactg
ggcagctaccgcaggaagaggaaaaactccaccgacctggactcatccacagaagatcca
atctctccaaaaaggaaaagccgccgcagatccagctgcagttcagagccaaacacacct
aaaagcgctgcaaagtgtgagggggacatttttacctttgaaaggccaggtaatacttca
ccacccacaacaccttcatcattctgcagcctatattatcctgattcaactgctttatct
ggtacagatggagaagatgttctgggggagctggagtttgataaggtgccctactcctct
ctcagaagaactcttgatcagaggagagctcttgtcatgcagctattccaggagcatggc
ttcttcccctcagctcaagctactgctgcgttccaggcgcgatacgctgatatcttcccc
actaaggtgtgtttacagcttaagatccgagaggtccggcaaaagatcatgcaaacggca
gctccgtcggagttggccggcacttcagatatatcctcattgccgggaccttctggggcg
gcggcagccagtgacctagctgcaggggcagagcctcaggaaaaagaggccgagcgggag
ggtgagcagaacagctcggaggagcccagaaatgctggcgattcacaggactccaccaga
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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