KEGG   Cyprinus carpio (common carp): 109104873
Entry
109104873         CDS       T05134                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
ccar03015  mRNA surveillance pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109104873
  09122 Translation
   03013 Nucleocytoplasmic transport
    109104873
   03015 mRNA surveillance pathway
    109104873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109104873
   03041 Spliceosome [BR:ccar03041]
    109104873
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109104873
Spliceosome [BR:ccar03041]
 Complex C
  Other components
   EJC/TREX
    109104873
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 109104873
NCBI-ProteinID: XP_018973733
UniProt: A0A8C2PWE9 A0A8C2A2C6
Position
31:complement(11743123..11744986)
AA seq 147 aa
MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtccacgagtgacttttatttgaggtactatgtgggccataaaggtaaattcggccac
gaatttctggaatttgaattcagaccagacggcaaactgagatatgcaaacaacagcaac
tacaagaacgacgtcatgatccgaaaagaggcatatgttcataaaagcgtgatggaagag
ttgaagagaatcattgatgacagtgagatcacaaaagaagacgatgccttgtggcctcct
ccagacagagtcggacgacaggaactggagattgtcatcggtgatgaacacatttcattc
acaacttccaaaattggatctttaattgatgtcaaccagtccaaggacccagaaggactc
agagttttctactacctggtccaggatctcaaatgccttgtattcagtctcatcggcctc
cacttcaagatcaagcccatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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