KEGG   Cyprinus carpio (common carp): 109107255
Entry
109107255         CDS       T05134                                 
Name
(RefSeq) cysteine protease ATG4D-like
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04136  Autophagy - other
ccar04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109107255
   04136 Autophagy - other
    109107255
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccar01002]
    109107255
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccar04131]
    109107255
   03029 Mitochondrial biogenesis [BR:ccar03029]
    109107255
Peptidases and inhibitors [BR:ccar01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   109107255
Membrane trafficking [BR:ccar04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    109107255
Mitochondrial biogenesis [BR:ccar03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    109107255
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 109107255
NCBI-ProteinID: XP_018976105
Position
1:931052..937594
AA seq 491 aa
MNSVSPSAVQYIVGGGAHEDKPSAQSRHHNGHGSVPDGLREGSGEPDEVDRLKAKFMSAW
NNVKYGWTVKSKTTFNKTSPLVLLGQSYLFNSEDEVDGFRQAFVSCVWLTYRREFPQLEG
SSLTTDCGWGCMLRSGQMLLAQGLLQHLMPPDWRWAECHPLTDVDFEVLKPRSPSRPAGM
SLPSFSSSWTSPISQRDPSSGSSEGHRWTPGGCNAASNEPQVEALHRKVVSWFGDHPSAP
FGVHQLVELGKESGKRAGDWYGPSVVAHMLRKAVARSTEFHNLAVYVAQDCTVYKGDIMR
LCELSESAGTGWKSVIILVPVRLGGESLNPSYIECVKNILKLKCCIGIIGGKPKHSLFFI
GFQDEQLLYLDPHYCQPVVDVTQGNFSLESFHCNSPRKMSFSRMDPSCTIGFYAQTKKDF
ECLCSAVSEVSVLSWSSKEKYPIFTIVEGRGQNYGMRGRAGGPMDGPANIFSCNRMSRNS
KRGSTDEFVLL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaactcggtgtctcccagtgccgttcagtacatagtgggcggtggcgctcatgaggac
aagccctcagcgcagtccagacaccacaacggtcacggctcagtgcctgacggcctcaga
gaaggctccggagagcccgatgaagtggatcgcctgaaagccaagttcatgtccgcctgg
aacaatgtcaaatatggctggaccgttaaatctaaaactaccttcaacaagacctcccct
ctggtcctcctgggtcagtcctatctgttcaatagtgaagatgaggtggatggtttccgg
caggcgtttgtgtcgtgcgtgtggctcacctacaggagggagtttcctcagctggaggga
tccagtctgaccacagactgcggctggggctgcatgctgcgcagcggacagatgctgctg
gctcaggggttactgcagcacctcatgcctccagactggaggtgggcggagtgtcatcca
ctgacagatgttgattttgaggtgctgaagcctcgctcaccctcccgtccggctggcatg
tcccttccgtctttcagttcttcctggaccagccccatttcccagagagacccgagctct
ggcagcagtgagggtcacagatggaccccggggggatgtaatgcagccagcaatgagcct
caggtggaggctttgcaccgaaaggtggtgtcctggtttggggaccatccctcagctcct
tttggggtccaccagttggtggagctgggaaaggagtctgggaagagggcaggggactgg
tacggcccgtccgtagtggcacatatgctaagaaaagcagtggctagatccactgagttt
cacaaccttgctgtatacgtggcacaggactgcacggtgtataaaggagatatcatgagg
ttgtgtgagctgtccgagtctgctggcacaggctggaaatcagtcatcattctagtgcca
gtacggctcggaggagaatcattaaacccctcctacattgagtgcgttaagaacattctc
aagttaaaatgctgtataggaattattggaggaaaacccaagcattccctgttttttatt
ggttttcaagacgagcagctattgtatctcgacccacactactgtcagccagtggtggac
gtcacccaaggcaacttctctctggagtcttttcactgtaactcacccaggaagatgagc
tttagtcgtatggatcccagctgcaccatcgggttctacgcgcagactaagaaagacttt
gagtgtttgtgttcagcggtcagtgaagtgagtgtcttaagctggtcctctaaagagaag
tatcccatctttacaattgtagagggcaggggacagaactatggaatgaggggcagagcg
gggggtccgatggatggtcctgcaaacattttctcatgcaacagaatgagcaggaacagt
aagagaggaagcacagatgagtttgtgctcctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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