KEGG   Cyprinus carpio (common carp): 109107644
Entry
109107644         CDS       T05134                                 
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109107644 (msh4)
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    109107644 (msh4)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV
Other DBs
NCBI-GeneID: 109107644
NCBI-ProteinID: XP_018976432
Position
33:17704435..17718601
AA seq 823 aa
MFCSSTEEVTPGSSSEAGLSSSTLTPYDLIDYSRVTHRQRDPPSSSGLLTSHRSDEVRNS
VCPGSSTATDTGALTAVFTDTTPIGAQRLINISGRADRISSSVGSSVHSWSSSTPHLRAT
PALSLHGRTPQRDLNMTTSSSASASHAASVIVAVVEGRGLARGEIGMASINVRCPELVLS
QFADTGTYAKVITKLHNLMPLEILMPDTASVRGQGTKLYTLITETFPSVTFTAVQRKYFN
EKKGLEYIQQLCVPEFSTVLMEVQTKYYCLASASALLKYFEFVQNSIYAPKSLKVIFTGS
EQTAMIDAISASNLELVVNHRDHRSKNTLFGVLNYTKTAGGERRLRSNILEPLLDVVTIN
SRLDTIQELLQNEELFFGLKNAIAHFLDIDDLLSALIQVPKQETIPVAEAKIMQVIQLKH
TLELIPSLKAMLSHSKTALLEAYYTSLDDSRFNSILDQIKSLINDDTSYMKGSLTMRTQK
CYAVRPNVSEFLDIARRAYTEVVDDIAGLVAQLGEKYSLPLRTSFSNTRGFFIQMKLEGG
VLPGGKLPEEFIKVTRQKNNYGFTTVDLMKMNDHSEEALKDIFHMSYVVVSRLLSDVCEH
IHCLYKLSDAVSMLDMLLSLAHACTVSDYGNVSYIIHNTSAKSLIIIDELGRGTSPEEGI
GICHSVCEFLINLKAFTLFATHFLELCQLQTLYPNVENQHMQVQHVRTEDGRDRVVYTYQ
LSRGQSDERNYGIRAAEMTNFPSDITEEAKTVAAKINQKLWAKHYSDPDTVKQRAVYRLA
TRLLQTARNSRLDPESLRQYLKGLKRQYETELQSATESVENEE
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgttttgtagcagcactgaagaggtgaccccgggttcgagctctgaggccgggctgagc
agcagcactctaaccccatatgacctgatcgactacagccgtgtaacccatagacagcgg
gatcctccttcatcttccggcctactgacttcacacagatccgatgaagtcaggaacagt
gtgtgtccaggatcaagcactgccactgatactggtgctctgacagctgtgttcacagac
acaacaccgatcggagctcagcgcctgataaacatcagtggaagagcagacaggatcagc
tcttctgtgggttcatctgtccactcctggagctccagcactccacatctgagggccacg
cctgcactctcactccatggccgaacccctcagagagacctcaacatgacaacgtcttca
tctgcatctgcgtctcatgcggcctctgtgatagtggctgtggtggagggacgtggttta
gctcggggggagattggcatggccagtatcaatgtgagatgcccagagctggttctctca
cagtttgcagacactggaacttatgctaaggttattaccaagctgcataacctgatgcct
ctggagattctgatgccagacactgctagtgtgagaggacaaggaaccaaactctacacc
ctcatcacagagactttcccgtcagtcacattcactgccgttcagaggaagtacttcaat
gagaagaagggcctggagtacatacagcagctctgtgtccctgagttcagcactgtcctg
atggaggtgcaaaccaaatactactgcctggcttctgcatctgccctgctaaaatacttt
gagtttgttcagaactcaatatatgctcctaagtcactgaaagtgatcttcaccggcagt
gagcagacagccatgattgatgcaatatcagcaagcaacttggagctagtagtgaaccac
agagatcacagaagtaaaaacactctgtttggggtcttgaactacactaagactgctggt
ggggagcgacggttacgctctaatattctcgagcccctgctggatgtggtcactatcaac
tcacgcctggataccatacaggagctgctgcagaatgaggagctcttctttggtctgaag
aatgccattgcacacttcctggatatagatgatctgctgtctgctcttattcaggtccca
aagcaagagacgataccagtggctgaagcaaaaataatgcaagtaattcagctgaagcat
actctggaactcatcccatcattgaaggcgatgctgtcacattccaaaacagccttgttg
gaagcatattacacctcacttgatgacagcaggttcaacagcattctggatcaaatcaaa
tcactgattaatgatgacaccagctacatgaaaggcagcttgaccatgcgcacgcagaag
tgctatgctgtgcggcccaacgtcagcgaattcttagatattgcacggcgagcctacaca
gaagtggtagatgacatagcaggattggtggctcagcttggagagaagtacagcctaccc
ctccggacaagtttcagcaacacacgtggcttctttattcaaatgaagctggagggtggg
gtcttacctggggggaagttaccagaggagttcatcaaagtgaccagacagaagaacaac
tatgggttcaccactgtagacctcatgaaaatgaatgaccacagtgaggaggctttgaaa
gacattttccacatgtcttatgtggtggtgtccaggttactgagtgatgtctgtgaacac
atccactgcctgtacaaactgtccgatgctgtgtcaatgctggacatgctgctttctttg
gctcacgcttgcactgtctcagattacggtaatgtttcttacatcatccacaacacaagc
gccaagtcactcatcattattgatgagctggggcgaggcaccagtcctgaggaagggatt
ggcatttgtcacagtgtctgtgaattcctcatcaatcttaaggccttcacactctttgca
acacacttccttgagctctgccagcttcaaactctttaccctaatgtggagaaccagcac
atgcaggttcagcacgtccgcactgaagatggaagagacagggttgtgtacacataccag
ctcagccgaggccaatcagacgagcgcaactatggtataagagcagcggagatgaccaat
ttcccgtcagacattactgaggaagccaaaactgtcgcagctaaaatcaaccaaaagctg
tgggccaagcattacagtgatcctgacacggtcaaacagagggcagtctatcgtctagcc
accagactgctgcagacggcccgtaactcacggctggatccagagagcctgcgccagtac
ctgaaggggttgaagagacagtatgagactgaacttcagagtgctacagagtcggtagag
aatgaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system