KEGG   Cyprinus carpio (common carp): 109108799
Entry
109108799         CDS       T05134                                 
Name
(RefSeq) stromal cell-derived factor 1-like
  KO
K10031  C-X-C motif chemokine 12
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04060  Cytokine-cytokine receptor interaction
ccar04672  Intestinal immune network for IgA production
ccar04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109108799
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109108799
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109108799
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccar04052]
    109108799
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109108799
Cytokines and neuropeptides [BR:ccar04052]
 Cytokines
  Chemokines
   109108799
Glycosaminoglycan binding proteins [BR:ccar00536]
 Heparan sulfate / Heparin
  Chemokines
   109108799
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 109108799
NCBI-ProteinID: XP_018977452
UniProt: Q5ZP81
Position
35:5709555..5715708
AA seq 104 aa
MDVKLIVIFALMAVVMHAPVLNAKPISLVERCWCRSTVNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNKEVCINPDTKWLQQYLRSAMNKMKKPNNSRAKKSAR
NT seq 315 nt   +upstreamnt  +downstreamnt
atggatgtgaaactgatcgtaatattcgctctgatggcggtcgtcatgcatgcaccggtt
ttaaatgccaagcccattagcctggtagagagatgctggtgccgttccacagtcaacaca
gtcccacagagaagcattcgcgagctcaagttcctccacacaccaaactgccccttccaa
gtcattgccaaactgaagaacaacaaggaggtgtgcattaacccagacaccaaatggctg
caacagtacctgaggagtgccatgaacaaaatgaaaaagcccaacaacagcagagctaag
aagtctgccagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system