KEGG   Cyprinus carpio (common carp): 109111366
Entry
109111366         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM9-like
  KO
K10649  tripartite motif-containing protein 9/67
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccar04131]
    109111366
   04121 Ubiquitin system [BR:ccar04121]
    109111366
Membrane trafficking [BR:ccar04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    109111366
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109111366
SSDB
Motif
Pfam: SPRY fn3 zf-B_box zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 zf-RING_5 PRY zf-RING_2
Other DBs
NCBI-GeneID: 109111366
NCBI-ProteinID: XP_018979840
Position
38:complement(1072501..1090606)
AA seq 717 aa
MDEMEEELKCPVCGSFFREPIILPCSHNICLACARNILVQTPEAESPQSSRASGSGVSDY
DYLELDKMSLYSETDSGYGSYGGFVSAPTTPCQKSPNGVRVFPPTVPPPPLAQHHLLPHT
GVLPPVPRNSCLTCPQCHRSLTLDDRGLRGFPKNRVLEGVVDRYQQSKAAALKCQLCEKS
PREATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRISRRTSPRKISTCTEHEL
ENLSMYCVQCKTPVCYQCLEDGKHSTHEVKALGAMWKLHKGQLSQALNVLSDRATEAKEF
LVQLRNMVQHIQENGVEFEACLVAQCDALIEALNRRKAQLLSRVTKEHEHKLLVVRDQIS
HCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHMTENQWGKGSLTPRMSSDFD
LTLDSGPLLQTIQQLDFVQMKVPAAPILQMEECCTQTNSATLSWKQPPLSTIAVDGYILE
LDDGNGGQFREVYVGTEMICTVDGLRFNSTYKSRVKAFNSSGVGQYSXTLVMQTSEIAWF
TFDSVSAHPDIILSNDNLTVTCNSYDDRVIMGNTGFSRGVHYWEMTIDRYDNHPDPAFGI
ARADVLKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTDGGISKGATVGVLLDFSRGIL
LFLINDEQQGPVAFNTLEGMYYPAISLNRNVQVTLHSGLPVPDFYTPGESEAAGSVC
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggatgaaatggaagaggagttaaagtgcccggtgtgcggctcgtttttccgcgaaccg
atcatcctgccgtgctcgcacaatatctgcctggcctgcgcgagaaacatcctggtgcag
acgcccgaagccgaatccccgcagagcagccgcgcgtcaggctccggcgtctccgattat
gattacttagaattggataaaatgagtctgtacagcgagacggacagcggatacggctct
tacggcgggttcgtgagcgcaccgaccactccgtgccagaagtcccccaacggggtgcgc
gttttcccccctaccgttcctcctccgcccctggcgcaacaccacctgctgcctcacacc
ggcgtcctgccgccggtcccccggaactcctgcctcacctgcccgcagtgccaccgcagc
ctgacgctggatgaccgggggctccggggcttccccaagaaccgtgtgctggagggggtt
gtggaccggtatcagcagagtaaagcagccgcgctcaagtgtcagctgtgcgagaagagc
ccccgtgaggcgacggtcatgtgcgaacaatgcgacgtgttctactgcgatccgtgccgc
ctgcggtgccatccgccccggggtccgctggccaaacaccggctcgtgcctccggcgcaa
ggcagaatcagccgccgcacgagtccccgaaagatctccacctgcaccgagcacgagctg
gaaaacctgagcatgtactgcgtccagtgtaagacccccgtgtgctaccagtgtctggag
gacggcaaacactccactcatgaggtcaaagcgctgggggccatgtggaagctccacaag
ggacagctctctcaagcactgaatgttctgtctgatcgggccacagaggccaaagagttc
ctggtgcagctcagaaatatggtacaacacatacaggagaatggagttgaattcgaggca
tgtttggttgcccagtgtgatgccctgattgaagctctcaaccgcaggaaagctcagctt
ctcagcagagtaaccaaagaacatgaacacaaactcttagtggttcgtgatcagatatcc
cactgcacggtgaagttgaggcagaccacaggattaatggaatactgtctggaagttatc
aaagaaaatgaccccagtggcttcctgcagatctcagatgctctgataagacgggtccat
atgacagagaatcagtgggggaagggctctctcacccctcgcatgagcagtgactttgac
ctgacgctggacagcggacccctgctgcagaccatacagcagttagactttgtccagatg
aaggttccagctgctcctattcttcagatggaggagtgctgtactcaaaccaacagtgcg
actctgtcgtggaaacaaccgcctctctccaccattgctgtggatggctacattttagaa
ctggatgatgggaatggaggccagttcagagaagtgtacgttggtacagagatgatctgc
actgtggatggtctgcgcttcaacagcacttataaatctcgtgttaaagcgtttaactcc
agcggagtcggccagtacagcnaaacgcttgtcatgcagacatcagagattgcctggttc
acctttgactctgtgtcggcccaccctgacatcatcttgtccaacgacaacctcacggtg
acgtgtaacagttacgacgaccgtgtcataatgggcaacacaggcttctctcgtggcgtg
cactactgggagatgaccatcgatcgctatgacaaccaccctgaccctgcgtttggaatc
gcccgggctgatgtcctgaaggacgtgatgctggggaaggatgataaagcctgggccatg
tatgtggacaacaaccgctcatggttcatgcataacaactcacacaccaaccgtactgat
ggaggaataagtaaaggagcgactgtgggtgtgctgctggatttctctcgtgggattctg
ttatttttgataaatgatgagcaacaggggcccgttgccttcaacacactggagggcatg
tactacccggccatcagcctcaaccgcaacgttcaggtgactcttcattctgggctgcct
gttcctgatttttatacacctggggaatctgaagctgcaggctcagtctgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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