KEGG   Cyprinus carpio (common carp): 109112424
Entry
109112424         CDS       T05134                                 

Definition
(RefSeq) hypoxia-inducible factor 1-alpha-like
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04137  Mitophagy - animal
ccar04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109112424
   04137 Mitophagy - animal
    109112424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccar03000]
    109112424
Transcription factors [BR:ccar03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    109112424
SSDB
Motif
Pfam: PAS_3 PAS_11 PAS HIF-1a_CTAD HIF-1 PAS_9 PAS_4
Other DBs
NCBI-GeneID: 109112424
NCBI-ProteinID: XP_018980901
Position
38
AA seq 712 aa
MDSFAPGKKRVSSERRKEKSRDAARCRRGKEAEVFYELARELPLPHSVTSNLDKASVMRL
ALSYLRLRKLLKTDVLDVESELDSRWNSSYLKALDGFLMVLSADGDIVYLSESVSKCLGL
PQIDLTGHSVFEFTHPCDHEELREMLAHRTGLSKKAKEQHTNRSFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGHIHTTDCIKKGVCEEKNVRSAYLVLICESIQHPANIEAPLDSRTFL
SRHTLDMRFTYCDERIKELLGFDPVDLLHHSVYEYYHALDSVHMTKAHHNLFVKGQVCTG
QYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQILSLQQTNSTNIK
QEQEEHHKESLRAEVSVEDLKEDAKAKDEQKEECVREELHDSLKGKPEALTVVDPILTLD
ITSTDSVISVLTEIPLYNDVMLPSSSALLPLSPLSLNDDDASTALLQPDDFPFSQSPAPD
SSRSQVDLPVDSELSDQLKPDHVERLFSMDIESKTPFNTQGVGLDLEMLAPYIPMNDDFQ
LQTFSPAESMCSSPGSVLELTPSSSTQTAPALPAAPLDLVSCDTISQNIRTTNQGNSREI
IQDSDISSKCQTNPKLLKRKLETIPLSEAIRLDSVLQVVNDFPEKKIRKSDASSSEGLCH
ATILLLPSDVARRLLSRSEGGAIMMPFPQITRYDCEVNAPVTGRQHLLQGEV
NT seq 2139 nt   +upstreamnt  +downstreamnt
atggattcattcgcacctgggaaaaaaagggtgagttcagagcgaaggaaggagaaatcc
agagatgcggcgcgttgtcggagaggaaaagaggcagaggtgttttatgaactggccaga
gaactgcccctcccccacagtgtcacctctaacctggacaaagcatcggtcatgagacta
gcactcagttacctgcgcctgcgtaaattactgaaaacagatgtactggacgtggagtct
gaattagactctcggtggaacagttcatatctgaaagctctagatgggtttctcatggtt
ctttctgctgatggcgacatcgtctacctgtcagagagtgtcagcaagtgtctgggcctt
cctcagatcgaccttactggacacagtgtgtttgagtttactcatccatgtgaccatgag
gagctcagagaaatgctggcacacaggactggtttgtctaagaaagcgaaggagcagcac
acaaacagaagttttctgttgaggatgaaatgtacactgaccagcagagggcgcactgtc
aatgtcaaatctgcctcctggaaggtgctgcgctgttcgggccatatccacacaacagat
tgcatcaagaagggggtgtgtgaggaaaaaaatgtgcgttctgcgtacctggtgctcatc
tgtgagtctattcaacacccggcaaacattgaagctcctctggactctagaacctttctc
agccgccacactttagatatgcgcttcacctattgcgatgagaggatcaaagagctgttg
ggttttgatccagtggatctgttgcaccattctgtgtatgaatactatcacgcactggat
tctgtccacatgaccaaagcacaccacaacttgtttgtgaagggacaagtgtgtactgga
cagtaccggctgctggctaaagcaggagggtttgcttgggcagagactcaagccactgtg
atctataacagtaaaaactcccagccacagtgtgtggtctgtgttaactacatcctcagt
ggcattgaacagcccaaacaaatcctgtcccttcaacaaaccaacagcacaaacataaaa
caggaacaagaagaacaccacaaggagtcactcagggctgaagtgtctgtggaagatttg
aaagaggatgcaaaagcaaaggacgagcagaaagaagagtgtgtgagagaggagctacac
gacagcctgaaggggaagccagaagcactgactgtagtagaccctatcctcacactggat
atcaccagcacagactccgtgatctctgtgttgacagaaattcctctctacaatgatgtt
atgttgccctcttcaagtgccctgctacccctctcacctctctccctaaatgatgatgat
gcctccacagcccttctacaacctgacgacttccccttctcacaatctccggctcctgat
tcttccagatcccaggttgatctccctgtggattcagaattaagtgaccagctaaaaccg
gatcatgtggaaagactattttccatggatatagagtccaagacaccctttaatacacag
ggcgtgggtttggatctggagatgttagctccatacattcccatgaatgatgatttccag
ctgcagactttttctccagctgagtcgatgtgttccagcccaggttcagtgcttgaactg
accccctccagcagcacacaaactgcccctgctctcccagcagcccctctagacttagtg
tcctgtgacaccatttcacagaacattagaaccacaaaccagggcaacagcagagaaatt
attcaagacagtgatatttcttctaaatgtcagacaaacccaaagctactcaagaggaaa
ctggagaccatacctttgtctgaagcaataaggctggattctgtgctgcaggtggtgaat
gattttccagagaaaaagatcagaaaatcagatgcttcatcatcagaagggctttgtcac
gccacgatactgttgctgccatctgatgttgcgagaaggttattgagcagatcagagggt
ggagccataatgatgcccttcccccagattactcgttatgactgtgaggtaaatgcacct
gtgactgggcggcagcacctgctacagggggaggtttaa

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