KEGG   Cynara cardunculus var. scolymus (artichoke): 112501237
Entry
112501237         CDS       T05604                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00900  Terpenoid backbone biosynthesis
ccav01100  Metabolic pathways
ccav01110  Biosynthesis of secondary metabolites
Module
ccav_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    112501237
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ccav01006]
    112501237
Enzymes [BR:ccav01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     112501237
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     112501237
    2.5.1.29  geranylgeranyl diphosphate synthase
     112501237
Prenyltransferases [BR:ccav01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   112501237
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 112501237
NCBI-ProteinID: XP_024960715
Position
LG 17:1137990..1138913
AA seq 286 aa
MAGTHLSIFRTNLSRPSTSPAPSSHHRSPITARVAQNLSYWDSIHSDIDSHLKKSIQIRQ
PTTVFEPMHHLTFSAPKTAASALCVAACELVGGVREDAIVAASAIHLVHAAAYTHDHLRL
TTDRVWSDPRPEIPHLYGSNIELLTGDGIMPFAFELLAQSMDPAGKNSDELLRVIIEITR
AVGAEGMVAGEGYEVEFDLLNSQPARRLHGCGAACGAILGGGNEEEIGRLKRCGEYVGKI
QGLLSQMDKVEGGKLELVEKWRGLALKELEYFDSRKIEQISTIFGV
NT seq 861 nt   +upstreamnt  +downstreamnt
atggctggaactcatctctctatcttcagaacaaatctcagccgtccatccacctcgccg
gctccgtcctctcaccatagatcgccgatcaccgcccgtgtggcccaaaacctatcttac
tgggattccatacattccgatatcgattcccacttaaaaaaatccatccaaatccgtcaa
cccaccaccgttttcgagccaatgcaccacttgacattttcagcaccgaaaaccgccgcc
tccgccctgtgcgtcgccgcctgtgagctcgtaggcggcgtccgggaagatgctattgta
gcagcgtcggcaatacatctggtgcatgcggctgcatacactcatgaccatcttcggtta
actaccgaccgagtctggtcggatcccagaccggaaataccgcacctgtatggttcgaac
attgagcttctaaccggcgatggaattatgccgtttgcgtttgagttactggctcagtcc
atggaccccgccggaaaaaactccgacgagctgttaagggtgatcattgagatcacgcga
gccgtgggtgctgaagggatggttgccggtgaaggttatgaagttgagtttgacctgttg
aatagtcaaccggcacggcggctccatggatgtggggcggcctgtggggccatattagga
ggtggcaacgaggaggagattggaaggttgaaaagatgcggtgaatatgtgggtaaaata
caagggttgttaagtcaaatggataaagttgaagggggtaaattggaattagttgaaaaa
tggaggggcttggctctaaaggagttggaatattttgatagtagaaaaattgagcaaatt
tccaccatctttggggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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