KEGG   Cynara cardunculus var. scolymus (artichoke): 112505690
Entry
112505690         CDS       T05604                                 
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 2 isoform X1
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
SSDB
Motif
Pfam: Amino_oxidase SWIRM NAD_binding_8 DAO Pyr_redox_2 Thi4 FAD_oxidored FAD_binding_2 Pyr_redox Pyr_redox_3 HI0933_like FAD_binding_3 AlaDh_PNT_C Shikimate_DH GIDA NAD_binding_9 Lycopene_cycl 2-Hacid_dh_C MurD-like_N
Other DBs
NCBI-GeneID: 112505690
NCBI-ProteinID: XP_024965373
Position
LG 2:67673698..67677026
AA seq 755 aa
METPVSDGRVSKRLLRKKSLSRNYDENLMDDYLEKQLGGSVRKRFRTKKELEKETEKEAM
IALSLGFPIDALLEEEIEANVVSELDGKEQNDYIVVRNHILSRWRANVQAWLSKGQIKET
VSNEYDHLLHSAYDFLLFNGYINFGVSPPFKAQMPEEATEGSVIIVGAGLAGLAAARQLL
AFGFKVIVLEGRNRPGGRVYTQKMGQKGNYAAVDLGGSVITGIHANPLGVLARQLSIPLH
KVRDKCPLYNPEGQPVAREIDSKVEFIFNRLLDKVTEFRQIMGECATDDISLGSVLERLR
QLYAVATTTEEKQLLDWHFANLEYANAGCLSHLSAAYWDQDDPYEMGGDHCFLAGGNWRL
IEALCEGVPIFYEKTVQTVRYSNEGVEVTAGDQTYQADMVLCTVPLGVLKKKTIKFIPEL
PERKLEAIGKLGFGLLNKVAMVFPYVFWGEDLDTFGCLSKNSSTRGEFFLFYSYHTVSGG
SVLVALVAGEAARSFEYTHPSTLLHRVLSILRGIYGPKGIDVPNPIQSICTKWGNDPLSY
GSYSHVRVHSSGSDYDILAENVENRLFFAGEATNRQHPATMHGAYLSGLREASCIYRVAK
GKQTQTHPKKSIRKIGGVSDILVNLFKKPDLASGNFLFVFDPSTDDPKSMGLMMVAIDSS
GSELCNDNGKVNISQHSDKQPMKLYTIVSRVQAQELQSVVGRGECGLTYLSKNLGLKLMG
SDCFTLLANSLISYIATRRGRLRNRVVYGNHVSYT
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggagaccccagtttcagatggtagggtatcaaagaggttgttgagaaagaaatcccta
tctagaaactatgatgagaatttgatggatgattatttggaaaagcaactaggtggttct
gtaaggaaaaggtttagaacaaagaaggaattggagaaagaaactgaaaaagaagccatg
atagccctttctttagggtttccgattgatgcgctgcttgaagaagaaatcgaagctaac
gtagtgagtgaattggatgggaaagaacaaaatgattatattgtggtgagaaaccatata
ctatcaaggtggagggctaatgtacaggcatggctttctaaaggacaaataaaggaaact
gtaagtaatgaatacgaccacttgttgcattcagcttatgattttcttttgtttaatggg
tatataaattttggagtttcaccaccattcaaggctcagatgcccgaggaagcaactgag
ggatctgtaataattgtgggtgcaggacttgctgggttagctgcggctcgccagttgtta
gcctttggttttaaggtcattgtcttggaaggtaggaaccgacctggtggaagagtttat
acccagaagatggggcaaaagggtaattatgctgcagtagatcttggtggcagtgttatt
acaggcatccatgcgaacccgcttggagttttggctagacagctttcaattcctcttcat
aaagttagagataaatgtcccttgtacaatccagaagggcaaccagttgctagggaaatc
gattccaaagtagaatttatatttaataggcttctagacaaagttaccgaatttagacaa
attatgggtgaatgtgctactgatgatatttctttgggttcagttcttgagaggcttaga
cagttgtatgccgtggctacaactaccgaggaaaaacaattacttgattggcattttgca
aacttagaatatgcaaatgcgggttgcctttctcacctctccgctgcctattgggatcaa
gacgatccttacgagatgggtggtgatcattgctttcttgcaggtgggaattggaggtta
attgaagcattatgtgaaggggttcccattttctacgaaaagactgtccaaacagttaga
tacagtaatgagggtgttgaggtgactgctggggatcaaacataccaagcagacatggtc
ctatgcaccgttcctcttggtgttctaaagaaaaagaccattaaattcataccagaatta
cccgaaagaaaactagaggcaattgggaaactgggattcgggctgctgaataaggttgct
atggtattcccttatgtcttttggggggaggatctggatacttttggctgtcttagcaag
aatagcagtacacgtggagagttcttcttgttttacagttatcatactgtttcgggagga
tcggttcttgttgcattggttgctggtgaagctgcaagatcgtttgaatacacacatcca
tccactttgcttcatcgtgttttaagcatcctcagaggtatatatggtccaaagggtatt
gatgtacctaatcccatccaatctatttgtacaaaatggggaaatgatcccctttcttac
ggttcatactctcatgtaagagtgcactcttctggtagtgattatgatatacttgcagaa
aatgtggaaaaccggcttttttttgctggtgaagccacaaatcgccaacatccggccacc
atgcacggtgcttacttaagtggcttaagagaagcttcatgcatttatagagtcgcaaag
ggtaagcaaacgcaaactcatcctaagaaaagcattcggaaaattggtggagtgagtgat
attctcgtaaatcttttcaagaagccggatctagcttctgggaacttcctttttgtattt
gatccttcgactgacgaccctaaatcaatggggcttatgatggttgctatcgatagttct
ggtagtgagttatgtaacgataacgggaaggtcaacattagtcaacattctgacaagcaa
cccatgaagctttacacgattgtatcgcgtgtacaggcacaagagttgcaatctgtggta
ggacgtggcgagtgtggattaacatatttgtcaaaaaatctcgggttgaaactaatggga
tcagattgttttaccctcttagcgaattccttgatttcatacattgctacaagaagaggc
aggctcagaaatcgggtagtttacggaaaccatgtttcatacacatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (19)   
   Pfam (19)   
All databases (29)   

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