KEGG   Cynara cardunculus var. scolymus (artichoke): 112507054
Entry
112507054         CDS       T05604                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020  RNA polymerase
ccav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112507054
  09124 Replication and repair
   03420 Nucleotide excision repair
    112507054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccav03021]
    112507054
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112507054
Transcription machinery [BR:ccav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112507054
  RNA polymerase III system
   RNA polymerase III
     112507054
  RNA polymerase I system
   RNA polymerase I
     112507054
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112507054
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 112507054
NCBI-ProteinID: XP_024967225
Position
LG 2:complement(3144862..3148390)
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQSDYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLEKSDTS
NT seq 216 nt   +upstreamnt  +downstreamnt
atgattattccggtccgatgcttcacctgcggcaaggttattggaaacaaatgggacacg
tatcttgatcttctccaatctgattacacggaaggagatgctcttgatgctttggggctt
gttcgttactgttgcagaagaatgctgatgactcatgttgatctcattgagaagcttctg
aactataatacattggagaagtctgataccagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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