KEGG   Cynara cardunculus var. scolymus (artichoke): 112507809
Entry
112507809         CDS       T05604                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112507809
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccav01009]
    112507809
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112507809
   03036 Chromosome and associated proteins [BR:ccav03036]
    112507809
Protein phosphatases and associated proteins [BR:ccav01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     112507809
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     112507809
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     112507809
SSDB
Motif
Pfam: B56 FAT
Other DBs
NCBI-GeneID: 112507809
NCBI-ProteinID: XP_024968295
Position
LG 2:complement(13121187..13124888)
AA seq 527 aa
MSIFGPETAGLLLASNSTISTMIKQFLAKIPRKSSKANATDADGGSSSSSVTTDVGNNGF
INTYNAISSRLNTVKKMSSSIFPASIMPAGEMIDPQIPFKDVQNSEKLRLLISKLNLCSK
LYDFQDQAQDSVEKDIKRQTLVEIIDFLSSESAKLSEPAMFAICKMCGNNLFRDFPPKNS
VYSPRGETEDEEPSFDPAWSHLHLVYEILLRFLSQTSLDPKVAKQYIDHSFILRLLDLFD
TEDPRERDCLKAILHRVYGKFMVHRPFIRMVVSNIIYRFVFETEKHNGIAELLEIFGSVI
SGFALPLKKEHKMFLLRALVPLHKPKSVGVYHHQLTYCIVQFIEKEPKLSSAVIMGLLKF
WPVTSSQKQLMFLSELEELLEMIHTDEFEKVMVPLFRRIDCCLRSSHFQVAERAHFLWNN
EHVLHLIMYNRQVIMPLVFSSLERNSQTHWSRTVLNLAQNMMKMLNDVDQELVVSCQGQS
EEDKSTSTVVAERRRLTWERLENIAAFQPVVGNVSILEETAPCIVSC
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgtccatttttggaccagaaactgcaggtttgttattggcttcaaattcaactatttcc
actatgatcaaacaatttctcgcaaaaatccctcgtaaatcgtcaaaagccaatgcaaca
gatgctgatggaggtagttcttcaagtagtgttacaacggatgtgggcaacaatggcttc
atcaacacttataatgccatttcaagtcgattaaacacagttaaaaagatgtcttcctca
atttttcctgcaagcatcatgccagcgggcgaaatgattgatcctcaaataccttttaaa
gatgtccaaaattcagagaagctgagacttctcatcagtaagttgaatctttgttcaaaa
ttatatgattttcaagatcaagctcaagattctgtggagaaagacataaagcgccaaact
ttagtagaaattatcgattttctctcatccgaatctgctaaacttagtgaacctgcaatg
tttgccatttgtaaaatgtgtggaaacaatctttttcgcgatttccctccaaaaaactct
gtttattcacctcgtggtgaaacagaagatgaagaaccgtcttttgatccagcatggtca
catttacaccttgtatatgaaatactccttcgatttctcagtcaaacttctcttgatcca
aaagttgccaaacagtatatcgaccattctttcatattaagattacttgatctatttgat
actgaagatcctagagaacgagactgtttaaaagccattctacatagggtttatggtaaa
ttcatggttcacagaccctttattcggatggttgtcagcaacatcatataccgttttgtt
tttgaaaccgaaaaacacaatgggattgcagaattattggagatttttggtagtgtgatt
agtggattcgctttgccattaaagaaagaacacaagatgtttttattaagggctcttgtt
cctctgcacaaacccaagtctgtgggcgtgtatcatcaccagctaacttactgtattgtt
cagttcatagagaaagaaccgaaactttcgagtgctgttataatggggctgctgaagttt
tggccagttacaagtagccagaaacagttgatgttcttaagtgagttggaagagttgctt
gaaatgattcataccgatgagtttgagaaggttatggttccattgtttcgccgaatagat
tgctgtcttcgcagttcccatttccaggtggctgagcgagcacatttcttatggaacaat
gagcacgtactacatctcatcatgtataaccgccaggtgataatgccgctagtcttctcg
tccttagagcggaactcccaaacccattggagccgcaccgtgctcaaccttgcacaaaac
atgatgaaaatgttgaacgatgtggatcaagagttagtggtttcgtgccaagggcagtca
gaggaggacaagtcaacctcaactgtggtggctgagaggcggcggttgacatgggaacgc
cttgaaaacattgccgcttttcaacccgtcgttggaaatgtttcaattttggaagaaaca
gcaccgtgtatcgtctcttgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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