KEGG   Cynara cardunculus var. scolymus (artichoke): 112509745
Entry
112509745         CDS       T05604                                 
Name
(RefSeq) ruvB-like 2
  KO
K11338  RuvB-like protein 2 [EC:5.6.2.3]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112509745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112509745
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ccav03037]
    112509745
Enzymes [BR:ccav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     112509745
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     112509745
  Chromatin remodeling factors
   SRCAP complex
    112509745
   INO80 complex
    112509745
   INO80 complex (yeast)
    112509745
   SWR1 complex
    112509745
   ASTRA complex
    112509745
Cilium and associated proteins [BR:ccav03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   112509745
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N DnaB_C AAA_19 AAA_22 AAA_5 AAA_16 AAA_25 Mg_chelatase ATPase Zeta_toxin SLFN-g3_helicase nSTAND3 TsaE CBFD_NFYB_HMF bpMoxR AAA_7 Parvo_NS1
Other DBs
NCBI-GeneID: 112509745
NCBI-ProteinID: XP_024970631
Position
LG 3:complement(4634361..4638713)
AA seq 464 aa
MVELKVSESRDLTRIERIGAHSHIRGLGLDSALEPRAVSEGMVGQTTARKAAGVIVQMVK
EGKIAGRAVLLAGQPGTGKTAIAMGMAKSIGLETPFAMLAGSELFSLEMSKTEALMQAFR
KAIGVRIKEETEVIEGEVVEIQIDRPAVAGAASKTGKLTLKTTEMETVYDLGAKMIEALG
KDKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENDMAPILVVATNRGITTIRGTNYKSPHGIPIDFLDRLLIISTQPYS
EEELRKILDIRCGEEDVDVSEDAKVLLTKIGVETSLRYAINLITSASLSCQKRKGKVVEM
EDVSRVYELFWDVKRSTQYLMEYQSQYMFSEAATMEDEEANMMV
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggtggagctaaaagtctcagagagcagagacctaacccgaattgaacgaataggtgct
cactcccacatccgtgggctgggtctggactcagccctagagcctcgcgcggtctctgaa
ggtatggtaggccaaaccactgcccgtaaagctgctggagtcatcgtgcagatggtgaaa
gaaggtaaaattgcaggtcgagctgttctcctcgccggccagcctggaacaggcaaaact
gccattgccatgggaatggccaaatccattggactagagaccccatttgccatgctcgca
ggtagcgaacttttctctctggagatgtctaaaacggaagcccttatgcaagcttttagg
aaggcaattggtgttaggattaaggaggagactgaagtgattgaaggggaagttgtagaa
atccagattgatcgtcccgcggtggcgggagcagcgtcaaaaacggggaaattgaccctg
aaaacaacagagatggagacagtctacgatctgggggcaaagatgattgaggctttgggg
aaggataaagttcaaagtggcgatgtgattgcaattgataaggcttcggggaagattaca
aaacttgggagatcattttcgaggtctagagattatgatgcaatgggaccacagacgaag
ttcgtgcagtgtcctgatggggagttgcagaagaggaaagaggtggtgcattgtgttaca
cttcatgaaatcgatgtcatcaatagcagaacacaggggttccttgctcttttcactggt
gacactggcgaaatacgagctgaggtgagggaacagattgatacaaaggttgcagagtgg
cgggaggaaggaaaggcagagatcgttccaggtgttctgttcattgacgaagtccacatg
cttgatatcgagtgtttttcgttcctaaatcgtgctttagaaaatgacatggcaccaata
ttggttgtggcaaccaaccgaggaatcacaacgattcgaggcacaaactacaaatcccca
catgggatcccaatcgatttcctggatcggctgctgatcatatcgacacaaccatactcg
gaagaagagctgcggaagattcttgatataaggtgcggagaggaagatgtagatgtatcg
gaagatgcaaaggttttgttgacgaaaatcggggtggagacgtctctgagatacgcgata
aatctgataacatcagcgtcattgtcatgccagaaaaggaaagggaaggtggtggagatg
gaagacgtgagtcgagtttacgagctgttttgggacgtgaagagatcgacgcagtacttg
atggagtatcagagccaatatatgttcagtgaagcagcaacaatggaagatgaagaagcc
aatatgatggtttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (20)   
   Pfam (20)   
All databases (35)   

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