KEGG   Cynara cardunculus var. scolymus (artichoke): 112512594
Entry
112512594         CDS       T05604                                 
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00730  Thiamine metabolism
ccav01100  Metabolic pathways
ccav01240  Biosynthesis of cofactors
Module
ccav_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    112512594
Enzymes [BR:ccav01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     112512594
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-GeneID: 112512594
NCBI-ProteinID: XP_024974410
Position
LG 5:complement(7926007..7932909)
AA seq 645 aa
MASIHANLTSVMCKNGNHSNLSKISKTSFLPVFDVAGDSANLWKKEAQSCIMVPRATLTF
DPPSTNVEKTKRKNTVDPAAPDFLPLPSFEQCFPQSTKEYREVVHEESGNVLKVPFRRVH
LAGDEPHFDTYDTSGPQNISPQIGLPKLRKDWIDMREKSGPPRYTQMYYAKQGIITEEML
YCATREKLEPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVVSSIE
EEVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVNGIAENL
NWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKEN
FAYEHWDDILDICNQYDIALSIGDGLRPGSIYDANDTAQFAELLTQGELTRKAWAKDVQV
MNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGT
ALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPHAQAWDDALSKARFEFRWL
DQFALSLDPMTATSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAE
EAVQQGMDAMSAEFQAAKKTVSGEQHGEAGGEIYLPESYINSLKK
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcgtcgattcatgctaatttgacatccgttatgtgtaaaaatggcaaccattctaac
ctgtcgaagatttcaaagacttccttcttgcctgtttttgatgtggccggtgattctgcc
aacttatggaagaaggaagcacaatcttgcatcatggtgcctcgtgccacattgaccttt
gatcctccatcaaccaatgtggagaagactaaaaggaagaacacagttgatccggctgcc
cctgattttcttccgcttccgtcttttgaacaatgtttcccacaaagcacgaaggaatat
agggaagttgttcatgaagagtctggtaatgttcttaaagttccatttcgacgcgttcac
ctggcaggggatgaaccacattttgatacctatgacaccagtggtcctcaaaacataagc
ccccaaataggactcccaaaattgcgcaaagattggattgatatgagggagaaatctggt
cctccgagatacacccaaatgtactatgctaagcaaggaatcatcaccgaagagatgctc
tactgtgctacccgcgaaaagcttgagccagagtttgtgagatcagaagttgctcgtggt
cgtgcaatcattccttccaacaagaagcaccttgagttggagccaatgattgttggaagg
aatttcttggtgaaagtgaacgctaacatcggaaattctgctgttgtaagctcaattgaa
gaagaagttcacaagcttcaatgggctacaatgtggggtgctgacaccatcatggatctt
tctaccggccgtcacatccatgaaacccgtgaatggattctccgtaattcttccgtgcca
gttgggacagtgccgatctatcaagcactagaaaaagtcaatggaatcgccgagaatctg
aattgggaagtgttccgtgagacgttgattgaacaggctgagcagggtgtggattacttt
acgatccatgccggtgttctgctccgctatatcccattaacggcaaagcgaatgacagga
atcgtttcccgaggcgggtcgatacatgcgaaatggtgcttggcttaccacaaggagaat
tttgcttatgagcactgggatgacatccttgatatctgcaaccaatatgatattgcctta
tccattggtgatggattaaggccgggctcgatttatgatgccaatgatactgctcaattt
gccgagctcttgactcaaggtgaactaacgcgtaaagcctgggcgaaggatgtgcaggtc
atgaacgaagggccgggacatatcccgatgcataaaattcctgaaaatatgcaaaagcag
ctggaatggtgcaatgaagcaccgttctacacacttggacctttgactaccgacatcgct
ccaggatatgatcacattacttctgccattggtgccgccaacattggagcccttggaacc
gcacttctctgttatgtgacaccaaaagagcaccttggtttacccaatcgtgatgatgtt
aaaaccggtgttatatcgtataagatagccgctcatgctgctgatttggctaaaggtcat
ccacatgctcaagcctgggatgatgcgcttagcaaagctcggtttgagttcaggtggttg
gaccaatttgctttatcgttggatccaatgactgccacatcgttccatgatgaaaccctt
ccatcggatggtgcaaaagttgctcatttctgctccatgtgtgggcccaagttctgttcg
atgaagattactgaggatgtgcgcaagtatgctgaggagcatggttatggaagtgctgaa
gaagctgttcagcaggggatggatgccatgagtgctgagtttcaggctgccaagaaaact
gtgagcggagaacaacatggcgaggctggcggagaaatctacttgccggaatcgtacatc
aattctttgaagaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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