KEGG   Cynara cardunculus var. scolymus (artichoke): 112515393
Entry
112515393         CDS       T05604                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E
  KO
K03250  translation initiation factor 3 subunit E
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ccav03012]
    112515393
   03051 Proteasome [BR:ccav03051]
    112515393
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112515393
Translation factors [BR:ccav03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    112515393
Proteasome [BR:ccav03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    112515393
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112515393
SSDB
Motif
Pfam: eIF3_N PCI RPN7 EIF3E_C COG6_N TPR_9 LpxD TPR_19
Other DBs
NCBI-GeneID: 112515393
NCBI-ProteinID: XP_024977955
Position
LG 7:complement(14980936..14986289)
AA seq 439 aa
MAMAKYDLTPRIAPNLDRHLVFPLLEFTQERELYPNDQILKAKIELLNNTNMVDYAMDIH
KSLYHTEDVPQDMVDRRVEVVARLKSLEEAAAPLVTFLQNPKAVQELRADKQYNLQMLND
HYQIGPEQIEALYQYAKFQFECGNYSGAADYLYQYRGLCTNAERSLSALWGKLAAEILMQ
NWEIALEELNRLKDIIDSKNFSSSLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDK
YLNAIQTNAPHLLRYLATAFIVNKKRRPLFKEFIKVIQQEQHSFADPITEFLACVYVNFD
FEGAQKKMKECEDVILNDPFLGKRVEESNYTVVPLKDEFLENARLFIFETYCRIHERINM
GVLAEKLNLNYEDAERWILNLIRTSKLDAKIDTQTGTVVMEPNHPNVYEQLIDHTKGLSG
RTYKLVTQLLENSQPQAAR
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggcgatggcaaagtacgatctgacacctcgaattgcccctaatcttgacaggcatcta
gtgtttccgttgttggaattcactcaagaacgcgagctttacccaaacgatcaaatcctc
aaagctaagatcgagcttttgaacaatactaatatggttgactacgccatggatattcat
aagtctctttaccacactgaagatgttccgcaagatatggtggacaggagagtagaggta
gttgcaagactgaagtctctggaggaggcagcagctccattggtcacatttttgcaaaat
ccaaaggcagttcaggagttgagggctgacaagcagtataaccttcagatgctcaatgat
cattatcagattggtcctgagcagatagaagccttgtatcagtatgccaagttccagttc
gagtgtgggaactactcaggagcagctgattacttgtaccagtaccgtggcttgtgcacc
aatgctgaaaggagtctgagtgccttatggggaaagttggcggctgaaatactgatgcag
aactgggagatagcccttgaagagctgaaccgattgaaggatattatagactcaaagaac
tttagttcttctctgaatcaagttcaaagtcggatatggctgatgcattggagtttattc
atcttcttcaaccatgataatggaagaacacaaatcattgacttatttaatcaggacaag
tatttaaatgccattcaaacaaatgctccacatcttttgcgctatcttgctactgcattc
attgtcaacaagaagagaaggcctctattcaaagagttcattaaagtcattcagcaagag
cagcactcctttgctgatccaattacagagtttttggcatgtgtttacgtcaattttgac
tttgagggggctcaaaagaagatgaaggagtgtgaggacgtgatactaaatgacccgttt
ctgggcaaacgagttgaagaaagcaactatacggtggtgccattgaaggatgagtttctt
gagaatgctcgtcttttcatatttgagacctactgcagaatacatgagcgcattaacatg
ggggtgcttgctgagaaactaaacctaaactacgaagatgctgaaaggtggattctgaat
ctcattcgaacctccaagctggatgctaagatcgacacccaaactggaacggttgtaatg
gaacccaatcatccgaatgtgtatgagcaacttatcgaccacacgaaaggactctcaggg
cgaacttacaagttagttacccagctcttggaaaactctcagccacaagctgctcgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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