KEGG   Cynara cardunculus var. scolymus (artichoke): 112515487
Entry
112515487         CDS       T05604                                 
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
  KO
K14487  auxin responsive GH3 gene family
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    112515487
SSDB
Motif
Pfam: GH3
Other DBs
NCBI-GeneID: 112515487
NCBI-ProteinID: XP_024978104
Position
LG 7:4755051..4757483
AA seq 599 aa
MAVDSATSSPLGPPACEKDSKALQFIEEMTKNCDSVQENVLSEILAQNAGTEYLQQWCLN
GATDRKTFKSKVPVITYEDLQPYIQRIANGDRSPILSSHPISEFLTSSGTSAGERKLMPT
IAAEMDRRQKLYSLLMPVMNLYVPGLDKGKGLYFLFIKAEAKTPSGLVARPVLTSYYKSQ
QFKTRPFDPYNVYTSPNETILCVDAFQSMYSQMLCGLVYREEVLRCGAVFASGLVRAIKF
LQLNWSQLALDIESGELSSKITDPAIRECISKILKPMPELAMFIREECCEGNWEGIITRI
WPNTKYLDVIVTGAMAQYIPILDYYSGNLPQTCTMYASSECYFGLNLTPMVKPSEVSYTI
MPNMGYFEFIPHDPSNPVTISRDSPPHLLDLADLELGKEYELVISTYSGLCRYRVGDILQ
VKGFHNSAPQFKFIRRKNVLLSIESDKTDETELQTAVENASELLKEFNTTVVEYTSYGDT
KTIPGHYVIYWELLMKDPTFRPTDEVLDQCCLAMEESLNSVYRQSRVADNSIGPLEIRVV
QNGTFEELMDYAISRGASINQYKVPRCISFTPIKELLDSRVISVHFSPTTPHWTAERRF
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggccgtcgattctgcaacctcttcccccctcggacctccggcgtgtgagaaagattct
aaagctcttcagttcattgaagaaatgaccaaaaactgtgactccgttcaagagaatgtg
ttgtcggagattctggctcagaatgccggcactgagtacctgcaacaatggtgtctcaac
ggcgcgactgatcggaaaacttttaagtcgaaagttccggtgatcacctatgaagacctt
caaccttatatccaacgtattgctaatggcgatcggtctcccatcctttcatctcacccc
atttctgagttcctcacaagttcggggacgtccgcgggtgaaagaaaactcatgcccacc
attgcagcagagatggatcgcagacagaagctttacagtctcctaatgcctgttatgaac
ttgtatgtgcctggtttagataaaggaaaaggtttgtacttcttgttcatcaaggcggag
gcaaaaaccccaagtgggttggtggcccgacccgttctcacaagctactacaaaagtcag
cagttcaagacccgaccctttgacccgtataatgtctacaccagccccaatgaaaccatt
ctctgtgttgacgctttccaaagtatgtactctcaaatgctatgtggtctcgtttatcgt
gaagaagttctccgatgtggtgctgtttttgcctccggtctcgttcgagccatcaagttt
ctccaactcaactggtcacaactcgctctcgatatcgagtccggcgagttgagctcgaaa
atcaccgatccggcgatcagggaatgtatttccaagatactgaaaccgatgccggagttg
gctatgttcatcagagaagaatgctgtgaagggaactgggaaggtatcatcactcggatt
tggcccaacaccaagtatctcgacgttattgtcaccggcgccatggctcaatacattccg
atcctcgattattacagtgggaatttaccccagacttgtacgatgtacgcttcgtcggag
tgttacttcggactgaacttaactccgatggtgaaaccctcggaggtgagttacaccatc
atgccgaacatgggttacttcgagttcatcccacatgatccatcgaacccggtgacaatc
tcacgcgactcgccgcctcatcttcttgatctcgccgatttggagctcggaaaagagtac
gagctcgtaatctcgacgtactcgggtctctgccggtaccgtgtcggcgatattctccag
gtcaaagggtttcacaactccgccccacagttcaaattcattcgccggaaaaacgttcta
ctgagcatcgaatctgataaaaccgacgaaaccgagcttcagaccgccgtggaaaacgcg
tcggagcttctaaaagaattcaacaccaccgtcgtggaatacaccagctacggagacacc
aaaactattcccggccactatgttatctactgggaattgctgatgaaagatccaactttc
cggccaactgatgaggttttagatcaatgttgtttggcaatggaggaatctttgaactcg
gtttatcgacaaagccgggtcgctgataactcgatcggtccgttggagattcgagtggtg
caaaacggaacgtttgaagaattaatggattacgcgatctcgagaggcgcttccattaac
cagtacaaagttccaagatgtatcagtttcacaccgatcaaggaactgctcgattcgaga
gttatctcggtgcatttcagtccaacgacaccgcactggactgctgaacgacgtttttaa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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