KEGG   Cynara cardunculus var. scolymus (artichoke): 112516047
Entry
112516047         CDS       T05604                                 
Name
(RefSeq) ATP-dependent RNA helicase eIF4A isoform X1
  KO
K03257  translation initiation factor 4A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112516047
   03012 Translation factors [BR:ccav03012]
    112516047
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112516047
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     112516047
   mRNA cycle factors
    Stress granule specific factors
     112516047
Translation factors [BR:ccav03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    112516047
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112516047
  Exosomal proteins of bladder cancer cells
   112516047
SSDB
Motif
Pfam: Helicase_C
Other DBs
NCBI-GeneID: 112516047
NCBI-ProteinID: XP_024978855
Position
LG 7:complement(3945308..3950169)
AA seq 208 aa
MDAVEASSHLSPASSTVSPQRHFYLAVDRIQFKMETLVDLLGMAGRRPWLPMVVCCSTRD
ELDAVCSAVSNISYISVTPLYSDLAEAERALVLDRFRHTTMMWNQKAAVQSGDEGDEKED
QKSHMIVATDACLPLLASGESPIGSSVLINYELPTRKETYTRRMATCLAADGIVINMVVG
GEVVTLKSIEESSSLVIAEMPINILEMF
NT seq 627 nt   +upstreamnt  +downstreamnt
atggacgcagtggaagcatcttcacatctttctcctgcttcctctactgttagtccacag
cgccatttctatctcgccgtcgacagaatccagtttaagatggagacattggtggatcta
ttaggaatggcaggccgtcgtccatggcttccaatggtggtttgttgtagcacccgtgat
gagcttgacgctgtttgctctgccgtttccaacatttcctacatttctgttacgccactg
tacagtgacctcgccgaagcagaacgtgctttggttttagatagatttcgccacacaaca
atgatgtggaaccaaaaagctgctgttcaatccggagatgaaggggatgaaaaggaagat
caaaagtctcatatgatcgttgcaaccgatgcttgtcttcctcttcttgcttcaggagaa
tcccctattggttctagtgttttgataaactatgaactaccaacaagaaaggaaacatat
acgaggcggatggcaacatgtttagctgcagatgggattgtgataaatatggtcgttgga
ggcgaagtggtgactcttaaaagcatcgaggaaagcagcagtcttgtgattgcagaaatg
cccataaatattcttgaaatgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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