KEGG   Cynara cardunculus var. scolymus (artichoke): 112516550
Entry
112516550         CDS       T05604                                 
Name
(RefSeq) probable histone H2A variant 3 isoform X1
  KO
K11251  histone H2A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112516550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112516550
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112516550
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    112516550
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112516550
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 112516550
NCBI-ProteinID: XP_024979409
Position
LG 8:24608944..24611132
AA seq 140 aa
MSGKGAKGLITGKTSNSAVNGSSNKDKDKKKPVTRSSRAGLQFPVGRVHRLLKTRVAANG
RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTI
AGGGVIPHIHKSLINKSSKE
NT seq 423 nt   +upstreamnt  +downstreamnt
atgtcaggaaaaggagcaaaaggtttgataacagggaagacatctaactctgctgtaaat
ggatctagcaacaaagacaaagacaagaagaagccagtcactcgctcttctcgagccggt
ctccagtttccggtgggtcgtgttcaccgtctattgaagactagagttgctgctaacgga
agggttggagcaacagctgccgtttacacagcggcaatcctagagtatcttactgccgag
gtgctcgaattggcaggtaacgcaagcaaagatctgaaagtaaagcgtatatcgccgagg
catttacagcttgccataagaggggatgaagaacttgacaccctcattaaaggaaccatt
gctggtggtggagttatccctcacattcacaagtcactcatcaacaaatcttccaaagag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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