KEGG   Cynara cardunculus var. scolymus (artichoke): 112516899
Entry
112516899         CDS       T05604                                 
Name
(RefSeq) probable solanesyl-diphosphate synthase 3, chloroplastic
  KO
K05356  all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00900  Terpenoid backbone biosynthesis
ccav01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    112516899
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ccav01006]
    112516899
Enzymes [BR:ccav01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.84  all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
     112516899
    2.5.1.85  all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
     112516899
Prenyltransferases [BR:ccav01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   112516899
SSDB
Motif
Pfam: polyprenyl_synt HEPPP_synt_1
Other DBs
NCBI-GeneID: 112516899
NCBI-ProteinID: XP_024979914
Position
LG 8:23047356..23051460
AA seq 415 aa
MMPATCHNLEFGRTSFVDFSACGCSFSSSFPSRNYARKVIRSANRGAGKVISCRRDDNIA
KCRVFSTEAPETLLNGTPPTLSGKKESRSLNSPSDLFEVVSDDLLTLNKNLQSIVGAENP
VLMSAAEQIFSAGGKRMRPALVFLVSRATLVLAGLEELTREHRRLAEIIEMIHTASLIHD
DVLDESDMRRGQETVHQIYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFAS
GEIKQASSLFDCDVELDEYLIKSYYKTASLIAASTKGAAIFSGVGKDVCEQMYQYGKNLG
LSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKESKLREIIESEFCETGSL
DEAIELVMASGGIERAQMLAKQKADAAIQCLNCLPQGAFRLALEGMVKFNLERID
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgatgccggcgacatgccataatcttgagtttggtcgaactagttttgttgatttcagt
gcttgtgggtgttcttttagttcttcatttccttcaagaaattatgcaagaaaagtgatt
aggagtgcaaataggggtgccggaaaagtgatatcttgccgccgggatgataatattgca
aagtgtagagtgttttccactgaagctcctgagactttgcttaatggtactccaccaaca
ttaagtgggaagaaagaatcaaggagcctgaattctccatcagatttgtttgaagttgtt
tctgatgatcttttaacattgaacaagaatctacaatctatcgttggcgcagaaaatccg
gtcttaatgtcggcagctgaacagatatttagtgctggtgggaagagaatgagacccgcc
ttggttttcttagtgtcaagagccacattggtgcttgccggtttagaggaactcacaaga
gaacataggcgtttggcggagatcattgaaatgattcatactgcaagcttaatacacgat
gacgtgttggatgaaagtgacatgagaagaggccaagaaaccgtccatcagatatacggt
acacgagtggctgttctagctggtgattttatgttcgcacaatcgtcatggtacctggcg
aatcttgaaaatctggaggtcataaagcttattagccaggttatcaaagattttgcaagc
ggtgaaataaagcaggcgtcaagtttgttcgattgtgatgttgaactcgatgaatatttg
atcaagagctactacaaaaccgcctcgttgattgccgctagtacgaaaggcgcagcgatc
tttagtggggtcggcaaggatgtctgcgagcagatgtatcaatatggcaagaacctgggc
ctgtcgttccaagtcgtggacgacatcttggatttcacacaatcggctgagcaactggga
aagccagctggcagcgacctggcgaaaggaaacctaaccgcgcccgtgattttcgctctc
gaaaaagagtcgaaactgcgagagatcatcgagtcggagttttgtgaaacggggtctctt
gatgaagctattgaactggtgatggctagtggtgggatagaaagggctcagatgctagcc
aaacagaaagctgatgctgcaatccagtgtctcaattgcttgcctcagggtgcgtttcgg
ctagcccttgaggggatggttaagttcaaccttgagcgtattgactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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