KEGG   Cynara cardunculus var. scolymus (artichoke): 112517477
Entry
112517477         CDS       T05604                                 
Name
(RefSeq) uncharacterized protein LOC112517477
  KO
K17925  sorting nexin-13
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ccav04990]
    112517477
Domain-containing proteins not elsewhere classified [BR:ccav04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   112517477
SSDB
Motif
Pfam: PXA Nexin_C PX
Other DBs
NCBI-GeneID: 112517477
NCBI-ProteinID: XP_024980692
Position
LG 8:21514496..21521666
AA seq 1021 aa
MKAMETLQDLIEEAKLRTVWWALCIFAVSYFLAHTSKSMWMNVPIAILLVSGSRILLNEV
EFRWKIRKTRPETYLSHLEKKQLSVNDSRLSTLPPPPKWKRKIDSPVVEAAMEDFINKLL
QDFVVDLWYSDITSDKEAPELIRAIIMDVLAEISARVKNINLVDLLTRDVVDLVGVHLEL
FRKNQAAIGVEVMVTLSSEERDERLKHHLMASKELHPAVISPESEYKFLKRIMGAVVAVV
LKPREAQSALVRCIARELLACLVMEPVMRFASPAYINELLELIFIANEGGKEADEDQSAN
SKGHKQDQAVATSSAKRPDLSYSHESDVKLSRHDNEIALPLVKSCNISTGLIQEETKHPA
AADWARILEAATQRRTEVLQPENLENMWTKGRNYKKKALKNAAKGVQSSTSAGVGIDGGI
KQTKGKEISPKKLETSTSVGIPPKPHLDGQRKDHLFDVDQSNASNFDGGGVEEKSIVGGG
SKNIFRKSNSASDLNNQTQIETAYPEVSRSIITEFYSANVGKRDVHNTNAGFDKVLRIEG
YVPKLKCRVLGAYFEKLGSKSFAVYSIAVTAAENNTWFVKRRYRNFERLHRQLKDIPNYT
LHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSISSKNYSFGKS
SSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVAGPSFTYEPVSSATSRSLTWKADELSN
SFTRQTTSESANSLSDNEDHDKEETIDHDETDSSAPLNGWHSDSELNSKGFPPRVVKHDE
LIRSLDTDKRGVRSEILNLAANFPSTSNRLEDPLGVPAEWTPPNVSVPLLNLVDKIFQLN
RRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIHWLRRDDIVAHGIRWIQDVLWPEGVFF
TRLNAQTQTGSQSDQDSPRTASHPSSSRVNKQGSFEEQLEAARRASDVKKMIFNGAPSTL
VSLIGHNQYKRCAKDVYYFLQSDVCLKQLAYGLLELVIITVFPELHDIITDVHDKKQFPP
V
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgaaggccatggaaactttacaggatctgatcgaagaagcaaagcttcgtactgtgtgg
tgggctctttgtatcttcgctgtctcttacttcttagctcacaccagtaaatcaatgtgg
atgaacgttcctatagctatacttttggtttcgggatcacggattctgttaaacgaagtt
gaattccgttggaagattaggaaaacccggccagagacgtatttgtcacacttggaaaag
aagcagttgtctgtgaatgattcaaggctttccacgttgcctcccccgcctaaatggaag
cggaaaatcgattcaccggtggttgaggctgctatggaggattttattaacaagcttttg
caagactttgttgttgatctgtggtattcagatattacgtcagataaggaggcacctgag
ctgattcgagcgatcattatggacgttcttgctgaaatatccgcaagagtgaagaacatt
aaccttgttgacttgttaacgagggatgtagttgatctagttggggtccacctagagctt
tttagaaagaaccaagctgctatcggtgtggaggttatggtaacattatcgtcagaagaa
agagatgaacggttgaaacatcatctaatggcttctaaggagcttcatcccgctgtgata
tctcccgagagtgagtacaagtttctcaagcggattatgggtgctgttgtggctgtagtc
ctaaaaccacgtgaagctcagtctgctttagttcgttgcattgcccgagagcttttagct
tgtttggttatggaacctgtgatgagatttgcaagtcccgcatatatcaacgagttgctt
gagcttattttcattgctaacgagggagggaaagaggcggatgaagatcaatcggctaat
tctaaaggccataaacaggatcaagccgttgctacaagctctgcaaaaaggcccgatctt
tcttatagtcacgaaagtgatgtgaaactttctaggcatgataacgagatagcacttcct
ttagttaaatcttgtaatatctctactggtttaattcaagaagaaacaaagcatccggct
gctgctgattgggctcgaattcttgaggcagcaacccagagaaggacagaggttcttcag
ccggaaaatcttgaaaatatgtggaccaaaggaagaaactataagaagaaagctctgaag
aatgctgctaaaggagtacagtcttctacatcagccggggttggaatagacggtggaatc
aagcaaactaagggaaaggaaatatcgcccaaaaagctcgagacttcaaccagcgtaggg
atcccaccaaagcctcatttagacggtcaacggaaagaccatctttttgacgttgatcaa
agtaacgcatcgaattttgatggaggaggagttgaagaaaaatctatagttggtggtgga
agtaaaaatatctttagaaaatcaaacagcgcttctgatttgaacaatcaaactcagatt
gaaaccgcatatccagaagtcagccgatcgattatcacagagttttatagtgcaaatgtc
ggcaaacgtgatgtacataatacgaatgctggttttgataaagtattacgcattgaagga
tatgttccgaagcttaagtgtcgggttctaggagcgtactttgagaaacttggttcgaaa
tcgtttgcggtctattcaattgcagtaacagctgctgaaaacaacacttggtttgtaaaa
agaagataccggaattttgagagattgcatcgacaacttaaggacatcccgaactatacg
ttacatttgcctcctaaaagaatattttcgtcaagcacagaggacgcgtttgtacatcag
cgctgcattcagctcgataaatatctgcaggatcttctgtctatagctaacgttgcggag
caacacgaagtatgggactttttgagtatttcttcaaagaattactcgtttgggaagtct
tcttcggtaatgagaaccttagcagtcaatgtggatgacgctgtggacgatatcgtccgt
caattcaaaggcgtttcagatggtttgatgcggaaagttgctggcccatctttcacttat
gaacccgtgtcttcggctacaagcagaagtttaacgtggaaagcagatgaacttagtaat
tccttcacgagacaaactacctcagagtcggctaatagtctttctgataacgaggaccat
gacaaagaggaaacaattgaccatgatgagacggattctagtgcaccacttaacgggtgg
cattctgacagcgagttaaactcgaaaggatttccaccaagggttgtcaagcatgatgaa
cttataagaagcttagatacggacaaaagaggagtgcgatccgaaatactcaatctggct
gcaaattttccttcaacttccaaccgactggaagatccgctcggtgtgccagcagagtgg
acaccacctaacgtgagtgttccgttgctaaatttggtggacaagatatttcaactcaac
cgaagaggctggttaagacgacaggtgttttggatatcaaagcaaattttgcagttaatg
atggaagatgctatcgatgactggctcttacgccaaatacattggctcaggcgagatgac
atcgtggctcacgggatccgttggatccaagatgttttgtggccggaaggtgtgtttttc
acgagattaaatgctcaaactcaaacgggttctcaatctgatcaagattctccgcgaact
gcaagtcatccatctagcagtagggtgaacaaacaagggtcgttcgaggagcaactggag
gctgctcgaagggctagcgatgtcaaaaagatgatctttaacggagcaccttctacattg
gtcagcttgatcggtcataaccaatacaagcgttgtgcaaaagacgtatattattttctc
cagtctgatgtatgtttgaagcaacttgcgtacggattactagaactcgtgatcataaca
gtctttcccgagctgcatgatatcataaccgatgttcacgataagaagcaattcccgccc
gtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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