KEGG   Cynara cardunculus var. scolymus (artichoke): 112517723
Entry
112517723         CDS       T05604                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112517723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112517723
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112517723
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    112517723
SSDB
Motif
Pfam: Sina_RING Sina_ZnF
Other DBs
NCBI-GeneID: 112517723
NCBI-ProteinID: XP_024980896
Position
LG 1:complement(16021915..16024786)
AA seq 432 aa
MADRTQNIIRRLQTLAPAAEFSDSDDDDEEIPREDFGPFNKRPRFIESAAQSPPQLQVRP
HSPIQQSQTVTGSNTYIEQVPASGSEGYETTTDEDDDLFDIEEDDDLDDIDDLDEGEEED
PDDVEEEGGEEVNTGGEEEGDDSVAEGEHQQQHVTEPSTSVASLTGREANSGDGRNAVAV
ALDAATTVMLTDKTLLDCPGCLKPLRAPIYQCENGHVSCSTCCDNANGVCLSCTSTVDFT
RNLAMEKLTGSILAYCKYRIFGCTEIMIYHKLVEHEQVCPQIACLCPHPSCSFVGFAEDL
YDHFNICHPSSATPFSFDTAFALTCENNQKHVFLQERNEQVIFILNHDLGENNRTFYVDC
IGPAKFKRVFVYQLIAKHLETYLSLQAVPEVYVKWEQHAPNKKYLTVPADFLDGNIDQFV
INICIKKAHSVE
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggccgacagaactcaaaacataatcaggaggcttcaaactttggctccagctgcggaa
ttttctgacagcgatgacgatgatgaggagattcctagggaagattttgggccatttaat
aagcggccgcggttcatcgaatcggcggcgcagtcgccaccccaactccaagtgcgaccg
catagcccgattcaacagtcgcagacggttacgggatcgaacacgtacatagaacaggta
cctgcgtcgggttccgaagggtatgagaccacgacggatgaagatgacgatcttttcgac
atcgaggaagacgacgatctggacgacatagacgatctggatgaaggtgaagaagaagat
cctgacgacgtggaggaggaaggaggagaagaagtgaataccggaggcgaggaggagggg
gacgatagtgttgcggaaggggaacatcagcagcagcatgtgacggagccttctacttcg
gtagcatcgctgacaggacgagaagcgaattccggtgatggacgtaacgctgttgcagtg
gcgttagatgctgctactacggtgatgctaaccgataagaccttgctggattgcccaggc
tgcctcaaacctttgcgtgccccgatctaccagtgtgaaaatgggcacgtctcatgttcc
acctgttgcgacaatgcgaatggtgtgtgtctttcctgcacctcaacagtcgacttcact
cgtaacctagccatggagaagttaactggatcaatcctagcatactgcaaatacaggata
tttggctgcaccgagatcatgatttaccacaaacttgttgagcacgaacaggtctgcccc
caaatcgcatgtttatgccctcatccctcatgctcatttgttggatttgccgaagacctt
tacgaccatttcaacatatgccatccatcttctgctactccttttagttttgacactgcc
tttgctcttacctgtgaaaacaaccagaaacatgtgtttcttcaagaacgcaatgaacaa
gtcatcttcattctaaaccatgaccttggagaaaataatagaaccttctatgtagattgc
attgggccagccaaattcaagagagtgtttgtctaccaactgatcgcaaaacatttggag
acatatttatctttacaggctgtgccggaggtctatgtaaaatgggagcaacatgcaccc
aacaagaagtatctaactgttccggcagactttctggatggaaacattgatcaattcgtc
ataaatatatgtattaagaaagctcattcggttgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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