KEGG   Cynara cardunculus var. scolymus (artichoke): 112518201
Entry
112518201         CDS       T05604                                 
Name
(RefSeq) uncharacterized protein LOC112518201
  KO
K08497  protein transport protein SEC20
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    112518201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112518201
Membrane trafficking [BR:ccav04131]
 SNARE
  SNAP-25[N] (Qb)
   Sec20
    112518201
SSDB
Motif
Pfam: Sec20
Other DBs
NCBI-GeneID: 112518201
NCBI-ProteinID: XP_024981584
Position
LG 9:4902460..4906118
AA seq 304 aa
MEVNASSSADIVVDEFNKTKKDWDDAYLQTLTYIRAIEEFGKSRSIGDAVAVNNKKDSLP
RLNGLAQDGLSLLSTAQFNLDLLVPQLPTDDHIQNAELTLQSWNEQIQSLRASLRNANLQ
AKANMRKAAQEERELLLGGGEESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVER
SGSTLMAFEESTGVLKKAESEYKGHRSLLMRTRNLLSTMKRQDVLDRIILVVGFLVFSLA
VLYVVSKRIGILKLQRKVIGAIKAGMAGEAEAAKRAGVDAINHIAQVNELAFPNDLEQPM
HDEL
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaggtaaacgcatcatcttcggcagatatcgttgtcgatgaattcaacaagacaaag
aaagattgggacgatgcatatcttcaaaccctaacttacattcgagccatcgaagaattc
gggaaatcaagatccattggtgacgcagtcgccgttaataacaagaaagattcgttgccc
agattgaacggccttgctcaagatggactgtctttgctgtccactgcacaattcaacctt
gatcttttggttccacaacttcccacagatgatcatattcaaaatgcagaattgactctt
cagtcatggaacgaacaaattcaaagtctgcgggcaagtctgagaaatgctaatcttcaa
gcaaaggcgaacatgaggaaagctgcccaagaagagagggagcttctcttaggaggtgga
gaagagtccacagttcgaaggcgcaatttacagacaaaagccggaatgacatctgcagca
gagagcattacagagagccttcgtcgtacacgccagctgatggttcaggaggttgaacgg
agcggaagcacactcatggcttttgaggaatcaacaggagttttgaagaaagcagaaagc
gaatacaagggtcatcgatcattactgatgcgaactcgtaacttgctttcaacaatgaag
cgccaagatgttcttgacaggattatacttgttgtgggattcctcgtattctcgttagct
gttctttacgttgtgtcaaagcgaattggaatactcaagttgcaaagaaaggttataggt
gctatcaaagctggtatggctggagaagcagaagccgctaagcgcgctggtgtagatgct
ataaaccacattgctcaggtcaatgaacttgcttttccgaatgatttagaacaaccaatg
catgatgaactttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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