KEGG   Cynara cardunculus var. scolymus (artichoke): 112518228
Entry
112518228         CDS       T05604                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120  Ubiquitin mediated proteolysis
ccav04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112518228
   04120 Ubiquitin mediated proteolysis
    112518228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ccav03110]
    112518228
   04131 Membrane trafficking [BR:ccav04131]
    112518228
   04121 Ubiquitin system [BR:ccav04121]
    112518228
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112518228
Chaperones and folding catalysts [BR:ccav03110]
 Other chaperones and cochaperones
  Others
   112518228
Membrane trafficking [BR:ccav04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    112518228
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  U-box type E3
   112518228
SSDB
Motif
Pfam: U-box TPR_1 TPR_2 TPR_11 TPR_8 TPR_16 TPR_17 ANAPC3 TPR_12 TPR_14 zf-NOSIP TPR_9 zf-Nse TPR_19
Other DBs
NCBI-GeneID: 112518228
NCBI-ProteinID: XP_024981617
Position
LG 9:complement(16561831..16569894)
AA seq 279 aa
MVKGVNTAAMQAEQLKLDGNLYFKKNKLGAAIEAYTEAITLCPSVAIYWTNRALCHLKRN
DWARVEEDCQKAVQLDRNSVKGHYMLGLALIRREKYAEGIKALERSLDLGRGANPNSYMV
EEIWQELARAKYQEWEHDSTKRSWDLQNLKESCEIALKEKHLCDVTQMEGFTDEVTDSTS
EQLEALKLVFSKVAEVDTPMEIPDYLCCKITLDIFRDPVIAPSGFTYERAVILDHLEKVG
KFDPITRETLHPSQLVQNLALKEAVQAFLEKHGWAYRMD
NT seq 840 nt   +upstreamnt  +downstreamnt
atggtgaagggtgtgaacacggcagccatgcaagcagaacaacttaagcttgatggaaac
ctctatttcaagaagaacaaattgggtgctgccatcgaagcttatacggaggcaattacg
ttgtgccctagtgttgcaatttactggaccaatcgagctttatgccatctcaagcggaat
gattgggcaagagttgaggaggattgccagaaggctgttcagcttgatcgtaattccgtc
aagggtcattatatgctagggcttgcactaatacgaagggaaaaatatgctgaaggaata
aaagcattggaaaggtctttggatcttggaagaggagcaaaccctaatagttatatggtg
gaggagatatggcaggagctagcaagagcaaagtatcaggaatgggagcatgattctacc
aaacgatcctgggatttgcaaaaccttaaagaaagttgtgagatagctcttaaagaaaaa
catttgtgcgatgtcactcaaatggaaggctttactgatgaagttacagattctacttca
gaacaattagaagctctgaaattagtattcagcaaagttgcggaggttgacacaccaatg
gagataccggactacctatgctgcaaaatcacacttgatattttccgtgatcctgtcatt
gctcctagtggttttacatatgagagggcagtcatcctcgaccatctcgaaaaggtgggc
aagttcgatccaatcacgcgggaaactcttcatccatcccagttggtccagaacttggca
ttgaaagaagcagtgcaagcatttttggaaaaacatggttgggcttacaggatggactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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