KEGG   Cynara cardunculus var. scolymus (artichoke): 112518958
Entry
112518958         CDS       T05604                                 
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112518958
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccav01007]
    112518958
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112518958
Enzymes [BR:ccav01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     112518958
Amino acid related enzymes [BR:ccav01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   112518958
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112518958
 Prokaryotic type
   Other AARSs
    112518958
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 112518958
NCBI-ProteinID: XP_024982543
Position
LG 10:complement(2115390..2133152)
AA seq 1183 aa
MDDVCEGKDFSFPKQEEKILQWWTEVKAFETQLEKTKGLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEHEIDTKLGIKSREDVIKMGIDVYNEE
CRSIVTRYVGEWEKVITRTGRWIDFKNDYKTMDLNFMESVWWVFSQLHKKGLVYRGFKVM
PYSTGCKTPLSNFEANSNYKEVPDPEIMVTFPILDDQEGAAFVAWTTTPWTLPSNLALCV
NSNLVYVKVKSKSNGKIYVVAESRLSELPVEKAKKGTPNGAVDDNSLPKAKGSTGGKAKS
SVVAYEVLDKFSGSSLVGKKYVPLFDYFKEFSDMAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIENQIINKGENLVMAVDDDGCFTERITDFSGRYVKEADKDIIQAVKEKGRLVK
TGSFTHSYPFCWRSDTPLIYRAVPSWFVAVEKLKDQLLENNNKTKWVPAFVKEKRFHNWL
ENARDWAISRSRFWGTPLPIWISEDGEEIEVMGSIEELERRSGMKVTDLHRHKIDHITLP
DKRGPKFGVLRRVEDVFDCWFESGSMPYAYIHYPFENAELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFEKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEVIDDYGADALRLYI
INSPVVRAEPLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGLAPFVPLDQATLC
NSPNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRT
GEEDCRTALSTLYHVLLTSCKAMTPFTPFFTEVLYQNLRKISSGSEESIHFCSFPEVQGK
RGDRIEQSVNRMTTIIDLARNIRERHNKPLKTPLSEMIVVHPDAEFLDDIAGKLKEYVLE
ELNVRSVVPCNDPLMYASLRAEPDFSVLGKRLGKSMRVVAEAVKGMSQEDILSFEKAGEI
TIATHCLKLTDIKIIRGFKLPDGVTEEQMDAAGDGDVLVILDLRPDESLFQAGFAREVVN
RIQKLRKKSALEPTDMVEVYFKSLDKDTSASAQMLKSQETYIKEALGSPLLDFSMIPKHA
VIIAEETFHNISNCNFKITLSRAALAFNEKAILEDLYSGNTKYAQGLQIYLLSRDHANLK
SEFQLGNGKIKVDCIENQPAVDVVLGEHVFLTVGDYLASTKAL
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggatgatgtatgcgaagggaaggatttctcgttcccaaaacaagaagagaagatctta
caatggtggactgaagtaaaagcatttgaaacccaactcgagaaaaccaaaggcctgccg
gaatacatcttctacgatgggccaccgtttgccactggcctacctcactacggccacatc
ctcgctggaactatcaaggacatcgtcacgcggtaccagacaatgacgggacaccacgtg
acacgccgttttggatgggattgccacgggttgccggtcgagcatgagattgacacgaaa
ctcgggattaagagcagagaggatgtgattaagatggggattgacgtgtataatgaggag
tgtaggagtattgttaccaggtatgttggggagtgggagaaggtaattacgaggacggga
aggtggattgattttaagaatgattacaaaaccatggatttgaatttcatggagagtgtg
tggtgggtgttttctcagctacataagaagggccttgtttacagagggtttaaggtgatg
ccgtacagtactggctgcaagactccactgtccaattttgaggctaattcaaactacaag
gaagtgcctgatcctgaaataatggtgacttttccaattcttgatgatcaagagggtgct
gcatttgttgcatggacaaccacaccatggaccctccctagtaatcttgcactttgtgtt
aactcaaatttagtatatgtgaaggtgaagagcaagtcaaatggaaaaatttatgttgtt
gctgaatctcgactatccgagcttccagtagagaaagcaaaaaaaggaacacctaatgga
gctgtggatgacaattcacttcccaaggccaagggatctactggtggaaaagcaaaaagc
tctgttgttgcttatgaagtgttggataaattttcaggatcttcacttgtgggtaaaaag
tatgtgccattattcgattactttaaggaattctcggatatggcgttcagagttgttgca
gatgattatgtaacttctgatagtggaactggaattgtgcattgtgctccagcattcggt
gaagatgattatcgtgtttgtattgaaaatcaaataatcaataagggagaaaatctagtt
atggcagttgatgacgatggctgctttacagagagaatcactgatttcagtggtcgctac
gtcaaagaggcagataaggatattattcaagcagtgaaggagaaaggaaggctggtcaaa
actggaagctttacgcattcatatccattttgctggagatctgatacccctctcatctac
agagcagttcccagctggtttgttgcagtagagaagttgaaagatcaattgctagagaac
aataataagacgaaatgggttcctgcttttgtgaaggaaaagcgctttcacaattggttg
gaaaatgctagagactgggccattagtagaagtaggttttggggcactccacttcctata
tggatcagtgaggatggtgaggagattgaagttatgggttccatcgaagaacttgaaagg
cgttcgggaatgaaggtcactgacttacatcgccacaaaattgatcacatcacacttcct
gacaagcgtggtccaaagttcggtgtgcttcggcgtgtagaggatgtatttgactgctgg
tttgaaagtgggtccatgccttatgcatatatccactacccgtttgaaaatgctgaactt
tttgaaaacaactttcctgggcattttgttgctgagggattggatcaaactcgtggatgg
ttttacactcttatggtcctttctacagcattatttgagaaacctgcatttaggaatctc
atatgcaatgggcttgtgctggctgaggatggtaaaaagatgagtaaaaggttgaagaac
tatccttctcctatggaagtcattgatgattatggcgctgatgcactgcgattatacatt
ataaattctccagtagttcgtgcagaacctttacggttcaaaaaggatggagtctatggt
gttgttaaagatgtatttttaccatggtacaatgcatataggtttctagttcaaaatgca
aaaagacttgaggtggaagggcttgcaccgtttgttcccctagatcaagccaccctttgt
aactcacctaatgtgcttgatcagtggatcaactcagccactcagagtctggttcatttt
gttcgtcaagaaatggatgcctatcgactctatacggtggttccttatcttttgaagttc
attgacaatttaactaatatatatgtacgtttcaatcggaaaagattgaaaggccgcact
ggagaagaggactgcaggacggcgctttcaactctgtaccatgtactgttaacttcttgt
aaagcaatgactccattcacaccattcttcaccgaggttctttatcaaaacttgcgaaaa
atatccagtggatcagaagaaagtattcacttttgcagttttcctgaagtacaagggaag
aggggagaccgtattgaacaaagtgttaatagaatgacgacaattattgatcttgcacgt
aatattcgtgagcgccacaacaaacctctcaaaactccactcagtgagatgattgttgta
catccagatgccgagttcttagatgacattgccggcaaactaaaagagtatgtgttagag
gagctcaatgtcagatctgttgtgccatgcaatgatcctttgatgtatgcttccttgcgt
gctgaacctgatttcagtgtgttgggtaaaagactgggcaaatcaatgagagtagttgca
gaggcagtgaagggaatgtcacaagaagacattttatcttttgaaaaagcaggggaaatt
actattgctactcactgtttgaagctgactgatatcaagattatccgtggatttaaactc
cctgatggtgtgacagaagagcaaatggatgcagctggtgatggtgatgttttggttata
ctggacttgcgccctgatgagtcattgttccaagccggttttgcacgtgaggttgttaac
agaatccaaaagttacggaagaagtctgcattggaaccaaccgacatggttgaggtctac
ttcaaatcattggataaagacacatctgcctctgcccaaatgttaaaatcccaggaaaca
tacatcaaagaggcgttaggctctcctttactcgactttagcatgattccaaaacatgct
gtgatcattgctgaggagacgttccacaacatctcaaattgcaactttaagataacgctg
tcaagagcagcattagcgtttaacgaaaaggcaatccttgaagacttgtattcagggaat
acaaaatatgcacaagggttgcagatatatttgttgtctagggaccacgccaatctcaaa
tcagaatttcaactgggaaacgggaagattaaagtggattgcatcgaaaatcagccagct
gtagatgtggtgttgggagaacacgtttttttgacagttggggattatcttgcaagcacg
aaagctttgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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